Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq767 140 2e-28 >seq767 Length=55330 Score = 140 bits (154), Expect = 2e-28 Identities = 281/414 (68%), Gaps = 2/414 (0%) Strand=Plus/Minus Query 97033 AGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGA 97092 || |||||| | | | ||| |||||||| ||||| |||||||| || ||||| ||| Sbjct 37996 AGTTGCTCTTTCAATGGCTCAGTGTGATTCGTGTAAATATGAGCATCGCCAAAAGTATGA 37937 Query 97093 ATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAG 97152 | ||| || ||||| |||| || ||||| || ||||| | || |||| | ||| Sbjct 37936 ACAAAATCACCAGGCTTCAAATTTGTAACATGAGCAATCATGTACGTCAATAAGGCATAC 37877 Query 97153 CTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAG 97212 ||||| || ||||| || || || |||||||||||||||||||| ||||| || ||| Sbjct 37876 GATGCAATATTGAAAGGAACTCCAAGACCCATATCAGCTGATCTTTGGTATAATTGGCAG 37817 Query 97213 GAAAGCTTTCCATCACACACATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCAT 97271 | | |||| | |||||||| ||| | | ||| ||||| || || | ||||| Sbjct 37816 CTCAATTCACCATTAGCGACATAAAATTGA-ACGAGACAGTGACATGGTGGAAGTGCCAT 37758 Query 97272 TTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGT 97331 || ||||| || | |||||| || | || | || | | ||| |||| || | Sbjct 37757 TTGTGGAATGTCCACTGGATTCCATGCGCTCAATATAATACGACGATCATTTGGATTGGC 37698 Query 97332 GTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTT 97391 | ||| | ||| | | ||||||||| |||| |||| || |||| | | | Sbjct 37697 TTTGATGCGTTCAATGACATCCTTTAATTGGTCAATTCCTTGGCCTTCATATTCATCATC 37638 Query 97392 AAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCC 97445 || ||||| || |||||||| | ||| || ||||||||||| || || Sbjct 37637 GCATGTTTTATATTTGGCACCAAAATGTCGCCACTGAAATCCATAAACTGGACC 37584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346674007159250