Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq726 114 2e-20 >seq726 Length=60972 Score = 114 bits (126), Expect = 2e-20 Identities = 210/304 (69%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 189256 CGTTGAAACGTTTATAGATGAAATAATTGTAAGAAGAGAACTATCGGATAATTTTTGTTA 189315 |||||| | ||| || ||| ||||||| | ||||| | ||||||||||||| Sbjct 19684 CGTTGATGCCTTTTGTGAAGAAGCAATTGTACGTCGAGAATTGAGTGATAATTTTTGTTT 19625 Query 189316 CTATAACAAACATTATGATAGTATCCA---GTCTACTCATTCATGGGCCAGAAAAACATT 189372 ||||| ||| |||| || | | | | ||| || ||||| | |||||||| Sbjct 19624 TTATAATAAAGATTACGACAATCTAAAAGGAATTACAGAT---TGGGCTATGAAAACATT 19568 Query 189373 AGAAGATCACATTAATGATCCTAGAAAGTATATATATTCCATTAAACAACTCGAAAAAGC 189432 | | |||||| ||| || | | ||| | ||| | ||| || | ||| | || Sbjct 19567 AAATGATCACCGTAAAGACAAACGTGATTATGTGTATACACGCAAAGAATTTGAAGAGGC 19508 Query 189433 GGAAACTCATGATCCTCTATGGAA-CGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAA 189491 ||||||| ||| | ||||||| ||| ||||||| || ||| | |||||| |||| Sbjct 19507 AAAAACTCACGATGATTTATGGAATAGCG-CACAAATTCAAATGACAAAAGAAGGTAAAA 19449 Query 189492 TGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTG 189551 ||||| | ||||| ||||||||||||||||| ||||| | |||||||| ||| || | Sbjct 19448 TGCATGGATTTTTGCGAATGTATTGGGCTAAAAAGATTTTAGAATGGACAGCAACGCCAG 19389 Query 189552 AAGA 189555 |||| Sbjct 19388 AAGA 19385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922896472541000