Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq57 109 6e-19
>seq57
Length=268943
Score = 109 bits (120), Expect = 6e-19
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||
Sbjct 68755 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 68696
Query 60126 TACTACCGAGGATTG 60140
|||||||||||||||
Sbjct 68695 TACTACCGAGGATTG 68681
Score = 109 bits (120), Expect = 6e-19
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||
Sbjct 69909 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 69850
Query 60126 TACTACCGAGGATTG 60140
|||||||||||||||
Sbjct 69849 TACTACCGAGGATTG 69835
Score = 109 bits (120), Expect = 6e-19
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||
Sbjct 72092 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 72151
Query 60126 TACTACCGAGGATTG 60140
|||||||||||||||
Sbjct 72152 TACTACCGAGGATTG 72166
Score = 107 bits (118), Expect = 2e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||
Sbjct 68401 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 68460
Query 60126 TACTACCGAGGATT 60139
||||||||||||||
Sbjct 68461 TACTACCGAGGATT 68474
Score = 107 bits (118), Expect = 2e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||
Sbjct 164390 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 164331
Query 60126 TACTACCGAGGATT 60139
||||||||||||||
Sbjct 164330 TACTACCGAGGATT 164317
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||| || ||||||||||||| |||||||||||||
Sbjct 163334 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 163393
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 163394 TACTACCGAGGA 163405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571631580587000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |