Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq57 109 6e-19 >seq57 Length=268943 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 68755 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 68696 Query 60126 TACTACCGAGGATTG 60140 ||||||||||||||| Sbjct 68695 TACTACCGAGGATTG 68681 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 69909 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 69850 Query 60126 TACTACCGAGGATTG 60140 ||||||||||||||| Sbjct 69849 TACTACCGAGGATTG 69835 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 72092 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 72151 Query 60126 TACTACCGAGGATTG 60140 ||||||||||||||| Sbjct 72152 TACTACCGAGGATTG 72166 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 68401 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 68460 Query 60126 TACTACCGAGGATT 60139 |||||||||||||| Sbjct 68461 TACTACCGAGGATT 68474 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 164390 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 164331 Query 60126 TACTACCGAGGATT 60139 |||||||||||||| Sbjct 164330 TACTACCGAGGATT 164317 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||| || ||||||||||||| ||||||||||||| Sbjct 163334 CTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACTA 163393 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 163394 TACTACCGAGGA 163405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571631580587000