Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq6 114 2e-20 >seq6 Length=649598 Score = 114 bits (126), Expect = 2e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 10422 ATAGAAATTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAAT 10481 || ||| |||| |||| ||||||| | || | || || | |||| ||||| ||| Sbjct 425303 ATTGAACTTCCAGAAGGCTGTTATGGACGAATTGCACCACGTTCTGGATTAGCAGCAAAA 425362 Query 10482 AAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTA 10541 || || |||||| |||| |||||||| | |||||||| |||||||||||| | || || Sbjct 425363 AATTTCATTGATGTTGGTGCTGGAGTTGTAGACGAAGACTATAGAGGAAATTTAGGTGTT 425422 Query 10542 ATATTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAA 10601 | | |||||||||||| ||| ||||||| | | ||| ||| | || ||||| Sbjct 425423 GTCATGTTTAATCATTCTGATGTCGATTTTAATGTCGCCAAAGGCGATCGTATTGCTCAA 425482 Query 10602 TTAATATGTGAAAAAATTTTATATCC 10627 || || |||||| ||| || ||||| Sbjct 425483 TTGATCTGTGAACGAATCTTTTATCC 425508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743284521568000