Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq767 210 2e-49 >seq767 Length=55330 Score = 210 bits (232), Expect = 2e-49 Identities = 413/601 (69%), Gaps = 16/601 (3%) Strand=Plus/Plus Query 20039 ATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTAT 20098 || ||||||| || | || || ||||| ||||||||| ||| |||| ||||||| | Sbjct 37396 ATCAATTTCCATTGCTTACAACCAAACGAGTATTTTGGCGAGGAGTTGCTGAAGAGCTTC 37455 Query 20099 TATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGA-TT 20157 ||||||| | |||||||| ||| || ||| ||| || ||| | ||| | || Sbjct 37456 TATGGTTCGTAAAAGGATCCACAGATGCTAAATTGCTAC-AGGCGAAGAATATAAAAATT 37514 Query 20158 TGGAGCGCACATGGATCTAAGC---AATT--TTTACACAGCAATGGATTTGACAACCGTC 20212 ||| || | | | || || |||| || | || | || ||| | | |||| Sbjct 37515 TGGGACGGAAACAG---TACGCGTGAATTCCTTGATGCATCC--GGTTTTCATGATCGTC 37569 Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 ||| || ||||||||||| || ||||||||||| ||| |||||||||| || ||||| Sbjct 37570 AAGTTGGTGATTTGGGTCCAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATATA 37629 Query 20273 TTGACATG--AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAA 20330 ||||| | | ||| || || |||||| | || |||||| | |||| ||| | Sbjct 37630 AA-ACATGCGATGATGAAT-ATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGA 37687 Query 20331 TTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGA 20390 || ||| | || ||||| || | | ||||| || |||| ||||| | || Sbjct 37688 ACGCATCAAAGCCAATCCAAATGATCGTCGTATTATATTGAGCGCATGGAATCCAGTGGA 37747 Query 20391 TGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAA 20450 | || |||||| | || |||||||| || |||||||| || |||||| Sbjct 37748 CATTCCACAAATGGCACTTCCACCATGTCACTGTCTCGTTCAATTTTATGTCGCTAATGG 37807 Query 20451 TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510 ||||||| || ||| | || ||| |||| ||||||||||| || || ||||||||||| Sbjct 37808 TGAATTGAGCTGCCAATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTCAA 37867 Query 20511 TATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGG 20570 ||||||| ||||| | | ||||| |||||||| ||||||||| |||| || | || Sbjct 37868 TATTGCATCGTATGCCTTATTGACGTACATGATTGCTCATGTTACAAATTTGAAGCCTGG 37927 Query 20571 TGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630 ||| || || || || | || || || ||||||||| ||||| | || || || || Sbjct 37928 TGATTTTGTTCATACTTTTGGCGATGCTCATATTTACACGAATCACACTGAGCCATTGAA 37987 Query 20631 A 20631 | Sbjct 37988 A 37988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399057386943625