Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq767 210 2e-49
>seq767
Length=55330
Score = 210 bits (232), Expect = 2e-49
Identities = 413/601 (69%), Gaps = 16/601 (3%)
Strand=Plus/Plus
Query 20039 ATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTAT 20098
|| ||||||| || | || || ||||| ||||||||| ||| |||| ||||||| |
Sbjct 37396 ATCAATTTCCATTGCTTACAACCAAACGAGTATTTTGGCGAGGAGTTGCTGAAGAGCTTC 37455
Query 20099 TATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGA-TT 20157
||||||| | |||||||| ||| || ||| ||| || ||| | ||| | ||
Sbjct 37456 TATGGTTCGTAAAAGGATCCACAGATGCTAAATTGCTAC-AGGCGAAGAATATAAAAATT 37514
Query 20158 TGGAGCGCACATGGATCTAAGC---AATT--TTTACACAGCAATGGATTTGACAACCGTC 20212
||| || | | | || || |||| || | || | || ||| | | ||||
Sbjct 37515 TGGGACGGAAACAG---TACGCGTGAATTCCTTGATGCATCC--GGTTTTCATGATCGTC 37569
Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272
||| || ||||||||||| || ||||||||||| ||| |||||||||| || |||||
Sbjct 37570 AAGTTGGTGATTTGGGTCCAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATATA 37629
Query 20273 TTGACATG--AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAA 20330
||||| | | ||| || || |||||| | || |||||| | |||| ||| |
Sbjct 37630 AA-ACATGCGATGATGAAT-ATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGA 37687
Query 20331 TTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGA 20390
|| ||| | || ||||| || | | ||||| || |||| ||||| | ||
Sbjct 37688 ACGCATCAAAGCCAATCCAAATGATCGTCGTATTATATTGAGCGCATGGAATCCAGTGGA 37747
Query 20391 TGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAA 20450
| || |||||| | || |||||||| || |||||||| || ||||||
Sbjct 37748 CATTCCACAAATGGCACTTCCACCATGTCACTGTCTCGTTCAATTTTATGTCGCTAATGG 37807
Query 20451 TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510
||||||| || ||| | || ||| |||| ||||||||||| || || |||||||||||
Sbjct 37808 TGAATTGAGCTGCCAATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTCAA 37867
Query 20511 TATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGG 20570
||||||| ||||| | | ||||| |||||||| ||||||||| |||| || | ||
Sbjct 37868 TATTGCATCGTATGCCTTATTGACGTACATGATTGCTCATGTTACAAATTTGAAGCCTGG 37927
Query 20571 TGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630
||| || || || || | || || || ||||||||| ||||| | || || || ||
Sbjct 37928 TGATTTTGTTCATACTTTTGGCGATGCTCATATTTACACGAATCACACTGAGCCATTGAA 37987
Query 20631 A 20631
|
Sbjct 37988 A 37988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399057386943625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |