Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq119 334 7e-87
seq205 93.3 4e-14
>seq119
Length=197918
Score = 334 bits (370), Expect = 7e-87
Identities = 629/918 (69%), Gaps = 14/918 (2%)
Strand=Plus/Plus
Query 13828 ATTCAACTTTATAATATTCAATAAAAA------CTAAAAATCAACATCTAACGAAAAAAC 13881
||||| ||||| || || |||| ||| ||| |||||| | ||||| | |||||
Sbjct 167069 ATTCA--TTTATGATGTTAAATAGAAATTATCACTAGAAATCAGCGTCTAATGTGAAAAC 167126
Query 13882 ATTATCGTCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAA 13941
| || | |||| ||||| || | ||||||||||||| ||| || ||| ||
Sbjct 167127 TTGTTCTTGACGACTAGACATAACTCCACTCTTTTGATATTCACCAACCTTTCGTTCGAA 167186
Query 13942 GAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACAT 14001
|||||| || || || || ||||| ||| ||||||||| ||||||||| | | |
Sbjct 167187 GAAGTTTGTCTTGCCCTCAAGTGAAATAAATTCCATAAATGAGAATGGATTTTTGGTATT 167246
Query 14002 AAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTG 14061
| | ||||||||| || | ||| | ||| ||| |||| || || || || ||
Sbjct 167247 ATAGACTTTATCAAGTCCCAATTCACCCAATAAATGATCAGCAACAAATTCTATGTACTG 167306
Query 14062 AGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTC 14121
|| |||||||||||||||||| || | | || || |||| | | |||||||||||
Sbjct 167307 AGTCATTAAATCACAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTC 167366
Query 14122 TTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAAT--TTCATTAGAAGGAGGA 14179
|| || || |||||||| | ||||| || | || | ||| || | ||
Sbjct 167367 CTTCTCAATTTTTACAGCCTCTGTGATAATT-TCA-ACTACTCTTTCCTTTGGTGGCTTC 167424
Query 14180 TATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTA 14239
| || |||||||| | ||||| || ||||| |||| |||||| || || ||||| |
Sbjct 167425 TGTTCAAGATGTTTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAA 167484
Query 14240 ATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATT 14299
|||||||| ||||||||||| || |||||||| ||||||| || || | |||||||||
Sbjct 167485 ATAAGTTCATTTGAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATA 167544
Query 14300 GCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCT 14359
|| || || || |||||| || || || || || ||||| || || | ||||||
Sbjct 167545 GCTGCAAAGCTACCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCA 167604
Query 14360 CCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATA 14419
||||| ||| || ||| | |||||||| ||| |||||| |||| || || |||| |
Sbjct 167605 CCAAAGTTTGCATTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACA 167664
Query 14420 AAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTAT 14479
| | ||| ||||| ||||| ||||| || || || | | | ||| ||
Sbjct 167665 CATGGAAGTGTCTCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCTAATATAA 167724
Query 14480 GTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCA 14539
|| ||||| | || ||||| || ||||||| ||||||||||| || || || |||
Sbjct 167725 GTTTCAATTAATATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCA 167784
Query 14540 TAAAAACATCTAGCTTCTGACCATTGTACCT-CTGAGTAAAATCTTTCGGCCAAATTTTC 14598
|| || ||| |||||||| ||| || | |||| | ||| | || ||||| ||
Sbjct 167785 TAGAAGAATCGAGCTTCTGGAACTTGAACTTCCTGACTGAAA-CGCTCAATTAAATTCTC 167843
Query 14599 ATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC 14658
||| || || |||||| || ||||| || || |||| | ||||| | ||||
Sbjct 167844 ATTTACGATGCCATCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTC 167903
Query 14659 TTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGT 14718
| || |||| || ||||| || | | ||| || || | ||| ||||| || |||||
Sbjct 167904 TGAATCCTTGAGATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGT 167963
Query 14719 CCAAAAACTAGCAACAGC 14736
||| || || || ||||
Sbjct 167964 CCAGAAGCTGGCTTCAGC 167981
>seq205
Length=143123
Score = 93.3 bits (102), Expect = 4e-14
Identities = 126/173 (73%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268
||| |||| ||| || || ||||||| ||| |||||||||||||| || ||||| ||
Sbjct 86382 AAAGTCACGATGTAGTCCTTCATCTCGTGAAATGAGTTCGTTTGAAAAAGTCAATCCAGG 86323
Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG-GAAAAGAATATTC 14327
||| | |||||| ||||||| | |||| ||||| || || || | |||| |||||
Sbjct 86322 CATTAGTCCTCGCTTTTTTAGCTAAAAGATTGCTGCAAAGCTTCTGCTAAAAAAATATAA 86263
Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14380
|| || || ||||| || || | || ||| || || ||| ||||| |||
Sbjct 86262 TTTCTACAGCGGCAAATGCAATAATTCTTTCACCCAA-TCTGCCTTTTTCTTC 86211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482188686947000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |