Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq442 116 3e-21
seq296 96.9 3e-15
>seq442
Length=86436
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
|||||||||||| |||||||| |||||||||||| || ||| || |||||| |||||
Sbjct 25013 GTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGACCATCTTCTAATTG 25072
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| || ||| |||| | | |||||||| || | ||||||||||| ||| |
Sbjct 25073 TTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTATCTTGAATCTT 25132
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
|||||| | | ||| |||||| |||||| ||| | ||| || | || || ||
Sbjct 25133 AGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTAATTGTCTTACCCGT 25192
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
||| ||||| || || || |||||
Sbjct 25193 CAAGGTTTTGACGAAGATCTGCAT 25216
>seq296
Length=113092
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | ||| |||| || | ||| |||||||| || || |||||||||
Sbjct 112856 TCCTCCACGAAGACGAAGAACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCT 112915
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| ||| || ||||||||||||||| || || |||| | | ||||| || ||
Sbjct 112916 CAATGTACGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGG 112975
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| ||||| || || || | | ||| || | | ||| ||||| |||||
Sbjct 112976 AATTCCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTCAAC 113035
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | |||||| |||| || ||||| || || || |||||||||||
Sbjct 113036 TTCTAATGTGATGGTTTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379223679788625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |