Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq119 214 4e-50
seq767 122 2e-22
>seq119
Length=197918
Score = 214 bits (236), Expect = 4e-50
Identities = 338/483 (70%), Gaps = 6/483 (1%)
Strand=Plus/Minus
Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACG---ATTTGGCGGAA 101911
|||||||||| | |||||| | |||||||| ||||| || | | || | |||
Sbjct 167660 AAGAAGAAGGCTGACTGGGCTTTAAATTGGATATCCAGCAAGAATGCAAACTTTGGTGAA 167601
Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971
| | || |||| ||||| || || ||||| || |||||||||||| || ||| | ||
Sbjct 167600 CGAGTTATTGCTTTTGCAGCTGTCGAAGGGATTTTCTTTAGTGGTAGCTTTGCAGCTATA 167541
Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031
|| ||||| ||||| || || | |||| || | || | || ||||| | |||||
Sbjct 167540 TTTTGGATTAAGAAGAGAGGATTAATGCCAGGGTTGACATTTTCAAATGAACTTATTTCG 167481
Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGAT 102091
|| |||||||| |||||||| |||||||||||| | ||| ||| | | ||| |
Sbjct 167480 AGAGACGAAGGACTTCATCGTGACTTTGCATGCTTAATGTACAAACA---TCTTGAACAG 167424
Query 102092 ACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151
| ||| ||| ||||| | |||||||| |||| || || || |||||| | |||
Sbjct 167423 AAGCCACCAAAGGAAAGAGTAGTTGAAATTATCACAGAGGCTGTAAAAATTGAGAAGGAA 167364
Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211
||| | || | | || || ||||| | |||| ||||| || | || |||| |||
Sbjct 167363 TTTTTAACTGACGCACTTCCAGTTAAGATGTTGGGCATGAATTGTGATTTAATGACTCAG 167304
Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAAT 102271
||||| |||||||| || ||| | |||||| |||| ||||||| || || |||||||
Sbjct 167303 TACATAGAATTTGTTGCTGATCATTTATTGGGTGAATTGGGACTTGATAAAGTCTATAAT 167244
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
| || || ||| |||| ||||| |||||| || ||| ||||| ||||| ||
Sbjct 167243 ACCAAAAATCCATTCTCATTTATGGAATTTATTTCACTTGAGGGCAAGACAAACTTCTTC 167184
Query 102332 GAA 102334
|||
Sbjct 167183 GAA 167181
>seq767
Length=55330
Score = 122 bits (134), Expect = 2e-22
Identities = 323/485 (67%), Gaps = 14/485 (3%)
Strand=Plus/Plus
Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282
||||| | || || ||||| | | || ||| ||||||||| ||||| || ||||
Sbjct 37402 TTCCATTGCTTACAACCAAACGAGTATTTTGGCGAGGAGTTGCTGAAGAGCTTCTATGGT 37461
Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATT---GGCCAAGAAGAAGATACACATCTGGA 35339
|| | | || ||||| || ||| | ||| |||||| ||| | || |||
Sbjct 37462 TCGTAAAAGGATCCACAGATGCTAAATTGCTACAGGC---GAAGAATATAAAAATTTGGG 37518
Query 35340 ACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTAT-ACGATAGAGCAGAGGGA 35398
||| || | |||| ||||| | || | | |||| | | ||| | || ||
Sbjct 37519 ACGGAAACAGTACGCGTGAATTCCTTGAT-GCATCCGGTTTTCATGATCGTCAAGTTGGT 37577
Query 35399 GATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGT 35458
|||||||| || || || ||||| || ||||| ||||||||||| ||||| | || ||
Sbjct 37578 GATTTGGGTCCAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATATAAAACATGC 37637
Query 35459 TCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGA 35518
| || ||| || | || ||||| ||||| || | | | | | | |
Sbjct 37638 GATGATGAATATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGAACGCATCAAA 37697
Query 35519 GAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTT 35578
| |||||| ||||| | | || || ||| ||||||||||| |||| ||| |
Sbjct 37698 GCCAATCCAAATGATCGTCGTATTATATTGAGCGCATGGAATCCAGTGGACATTCCACAA 37757
Query 35579 ATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTC 35637
||||| ||||| ||||| ||| || || | |||||||||||| |||||||| ||||||
Sbjct 37758 ATGGCACTTCCACCATGTCAC-TGTCTCGTTCAATTTTATGTCGCTAATGGTGAATTGAG 37816
Query 35638 GTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCA 35695
||||| || || || || ||| || ||| || | || || || ||||||||||||
Sbjct 37817 CTGCCAATTATACCAAAGATCAGCTGATATG--GGTCTTGGAGTTCCTTTCAATATTGCA 37874
Query 35696 TCATA 35700
|| ||
Sbjct 37875 TCGTA 37879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989254027853875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |