Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq343 475 4e-129
seq119 260 2e-64
>seq343
Length=103200
Score = 475 bits (526), Expect = 4e-129
Identities = 1107/1658 (67%), Gaps = 39/1658 (2%)
Strand=Plus/Plus
Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126
|||||||| || |||| || |||||||| ||||| || || | ||||||||||||||
Sbjct 5041 GCGGGTTTTGTTCGTAAGTAATACATTCCAGTTTTCAGTCCCATTTTCCATCCGTAAAAA 5100
Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186
|| || ||||| ||| |||| | || || |||| ||| ||||| | || ||||||
Sbjct 5101 TGAATGGACGTTAATTTCCCATAATTGGGTTCAGCTACATGAATATTAAACGACTGACTT 5160
Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCC 62246
|| || || || ||||| | || |||| ||||| || ||||| | |||||||
Sbjct 5161 TGGTCTATAAAAGCTCCACGATCGGCAGACATTTGAATTTGTGTCTTGACGGAAATTTCC 5220
Query 62247 CAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-----TATTCTGAATGG 62301
|||| |||||||| | || ||||| ||||||| |||| || |||| || |
Sbjct 5221 CAAACCGTTTTATATATATTTTTTATATCATCTGGAA--TTTGCTCAATAGTCTGTATTG 5278
Query 62302 ATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 62361
| ||| || | | ||||| | ||||| || || |||| |||||| | || || |
Sbjct 5279 AACCATTATTTGCAATAATTTTGTTCTTCATATCGTCATCCCATAAACCACGTTCAGTCA 5338
Query 62362 AAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGT 62421
|| | | | ||||| | ||||| ||||| ||||| ||| | || | ||| | |
Sbjct 5339 AATCCTTGATAAGATGGTGATTAACAACTTGAAATTCACCACTGAGAACACGACGATTAT 5398
Query 62422 AAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 62481
||| |||||| || || ||||| | ||||||||| |||||||| |||||||||||||
Sbjct 5399 AAACATTACTTGTGTAAGGTTCAAAGCTCTCATTATTACCCAAAATCTGAGCAGTTGATG 5458
Query 62482 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTT 62541
| |||||||| ||||| | || | ||||| ||||| | || | ||||| ||||
Sbjct 5459 CTGTCGGCATTGGTGCAATTAAGAGTGAATTTCGGAGACCAAACTTTTTAATTTTTTCTT 5518
Query 62542 TTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAA 62601
||||| |||||||| ||| | ||| | || | |||||||| |
Sbjct 5519 TTAGAGCTTCCCAATCCCACAAATCGGTGGGAGTCTTATCCCACATATCATATTGTAATA 5578
Query 62602 TACCGTT--ACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAG 62659
||| || || || || |||| | || || ||||||||||| | || ||||
Sbjct 5579 CACCTTTTGAC-ACCGGAC-ATCCATCGTAAGTCTCATATGGTCCCAATTGTTCTGCTAA 5636
Query 62660 TTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATC 62719
|| ||| || | ||| |||||||| |||||||| |||||||| || | | ||||| ||
Sbjct 5637 TTCACAGCTGGACTCCAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTTAAATT 5696
Query 62720 TTGTGCTTCCGGGCTA---TCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCC 62776
|| ||||| | || ||| |||| | | | |||||| || || || |||||
Sbjct 5697 TTTCGCTTC---GTTAGATTCATATGGCATTCTCATCAAAATAAAAGCATCTGCCAATCC 5753
Query 62777 TTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGG 62836
|||||| ||||| || ||||| | |||||| || || || ||||||| || ||
Sbjct 5754 TTGAACTCCAATTCCAATAGGACGATGTCTAAAGTTTGACCGTTTAGCTTCTTCAACGGG 5813
Query 62837 ATAATAATTAATATCTATAATTTTATTGAGAT---TTCTGACAATTACTTTGACCACATC 62893
||| ||||| | | ||||||||||| | || || |||| ||| |||| || ||
Sbjct 5814 ATAGTAATTTACGTTAATAATTTTATTCAAATTCCTTGTGACTATT--TTTG-TAACTTC 5870
Query 62894 CTTCAGTTTGAGAAAATCAAATCGCCCATCTATT-------ACAAACATGTTCAATGCAA 62946
||||| |||| |||| ||| || | | || ||| |||||||| || || ||||
Sbjct 5871 CTTCAATTTGTGAAAGTCATAT-TCTCTTCGATTTTGTTTGACAAACATATTTAAAGCAA 5929
Query 62947 CAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGC 63006
||||| | |||||| || || || |||| | | |||||||| ||| || || |
Sbjct 5930 TTGATGCTAAATTACAAACTGCAACTTCATCCTTACTTGAATATTGTACTATTTCCGTAC 5989
Query 63007 AAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 63066
| | ||| ||| || || || | ||| |||||||| || ||| || | ||
Sbjct 5990 ATAAATTCGAACAACGTATTGTCCCAAGATTCTGTTGATTTGATTTCCGGTTGCATGAAT 6049
Query 63067 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 63126
||||||| || || | || ||||||||||| | |||| || || || || ||| |
Sbjct 6050 CCTTATACAGCATATAAGGTGTACCAGTTTCTACTTGAGCCTCAATGATTGCGAACCACA 6109
Query 63127 CGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGT--ATACAA 63184
|| | ||||||| | | | || || | |||| ||| |||| | ||| |
Sbjct 6110 AATCTTGTGCCTTTACTTGACGAATATACCTTCCTTCTGCTTC--ATAGCCTTCATAAAG 6167
Query 63185 TCGTTCGAACTCGTCTCCCCAAAC-ATTGTCCAA-TCTAGGACATTCATCCGGACACATC 63242
| | || || ||| || || ||| || | |||| || ||||||||
Sbjct 6168 TTTCACAAATTC--CTCACCGTACGATTCAAAAAGACCGGGACTACTATTAGGACACATT 6225
Query 63243 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63302
|| |||||| | | | | | || || ||| || | ||| |||||||| | ||
Sbjct 6226 AATGACCACATTTCATTGTTTTCAACCCGACGCATGAACAAATCTGGAATCCACAATGCA 6285
Query 63303 ATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63362
||| | ||||| | ||| ||| || ||||| ||||| || || | ||| || ||
Sbjct 6286 TAAAACATGTCTCTAGCTCTGACTTCTTCTTTTCCAGTATTTTTCTTTAAATCCAGAAAT 6345
Query 63363 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63422
| | ||||||| |||||| |||||||| ||||| || | | || || ||||| |||
Sbjct 6346 TCAAAAATATCACCATGCCAAGGTTCCAAATATATTGCAAACGCGCCTGGACGTTTATTT 6405
Query 63423 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63482
|| || || || | || | ||||| ||||| || ||||| |||||||||| || ||
Sbjct 6406 CCACCTTGGTCAACATAACGTGCGGTATTATTGTATACTCTTAACATTGGAACAAGGCCA 6465
Query 63483 TTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT 63542
||||| || ||||| ||||| | ||||| ||| | || ||||| | ||
Sbjct 6466 TTTGAAATCCCATTTGTACCAGCTATATATGTTCCTTTTGCTCGAATGCAATGAACATTA 6525
Query 63543 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATG 63602
| ||| ||||| ||||| ||| |||||||||||| ||||||| || ||||| ||
Sbjct 6526 ACACCAATTCCACCTGCTGATTTGCTTATTAATGCGCATTGTTTTAATGTATCATAAATA 6585
Query 63603 CCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTA 63662
|| || || |||||| ||| |||| || || || | ||| | || |
Sbjct 6586 CCCTCAATAGAATCATCTGACATTGATAGTAAGAAGCATGAGGATAATTGAGGGCGTGGC 6645
Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63700
||| | || ||||| || ||||| || ||||||||
Sbjct 6646 GTTGCAGCTGCGAATAAAGTTGGAGATGCATGCGTAAA 6683
>seq119
Length=197918
Score = 260 bits (288), Expect = 2e-64
Identities = 565/834 (68%), Gaps = 15/834 (2%)
Strand=Plus/Plus
Query 33275 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33334
|||||||||||| | ||||| |||||||| || | |||||| || || || || ||
Sbjct 167142 AGACATAACTCCACTCTTTTGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCC 167201
Query 33335 TTCCAATGATATATTTTCCATGAAATCA-AACGGATTGGTAACATTGTAAAtttttttAA 33393
|| | ||| ||| |||||| |||| | || ||||| | ||| || | ||| | ||
Sbjct 167202 CTCAAGTGAAATAAATTCCAT-AAATGAGAATGGATTTTTGGTATTATAGACTTTATCAA 167260
Query 33394 ATCCCAATTCA-GAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCA 33452
|||||||||| ||| ||| ||| || || |||||||| || |||| | |||
Sbjct 167261 GTCCCAATTCACCCAATAAAT-GATCAGCAACAAATTCTATGTACTGAGTCATTAAATCA 167319
Query 33453 CAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGAT 33512
|||||||| || | | ||||||||||| || |||| | |||||| | ||||| |
Sbjct 167320 CAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTT 167379
Query 33513 ACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGG---ATGTAATAAATGT 33569
|| || | ||| ||||| | ||| | ||| | ||||| ||| | ||||
Sbjct 167380 ACAGCCTCTGTGATAAT---TTCAACTACTCTTTCCTTTGGTGGCTTCTGTTCAAGATGT 167436
Query 33570 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTA 33629
|| |||| || ||||| || || | || || || |||||||| ||| | ||| ||
Sbjct 167437 TTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTT 167496
Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689
||||| || | || ||||||| || | ||| |||| ||||||||| | || ||
Sbjct 167497 GAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTA 167556
Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33749
|| |||||| || ||||| || || ||||| ||||||| || || ||| | ||
Sbjct 167557 CCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCA 167616
Query 33750 CT-GTCATG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33806
| | || |||||| ||| |||||| || |||||||| || ||||| || | ||
Sbjct 167617 TTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTC 167676
Query 33807 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33866
|| || ||||| || | ||| | || |||| ||| |||||| || || ||
Sbjct 167677 TCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCTAATATAAGTTTCAATTAAT 167736
Query 33867 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33926
| ||||| ||||| || | ||||| || || || || ||||| ||||| ||| |
Sbjct 167737 ATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGA 167796
Query 33927 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCA 33986
|| || | || || ||||| || || || || |||||| ||||| || || |||
Sbjct 167797 GCTTCTGGAACTTGAACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCA 167856
Query 33987 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTAG 34045
||| || ||||| || || |||||||| ||||||| | | | | | | ||
Sbjct 167857 TCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTCTGAATCCT-TGAG 167915
Query 34046 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 34099
|| ||||| || | |||||||| |||| ||| ||||| || |||||||| ||
Sbjct 167916 ATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAA 167969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629612712462000
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