Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq343 484 6e-132
seq119 351 9e-92
>seq343
Length=103200
Score = 484 bits (536), Expect = 6e-132
Identities = 1140/1689 (67%), Gaps = 59/1689 (3%)
Strand=Plus/Plus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
||||| || || | |||| ||||| || | |||||||| | |||||||||||||||
Sbjct 5014 TCAACAGTAAACTGAATAGCATTTGCAGCGGGTTTTGTTCGTAAGTAATACATTCCAGTT 5073
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| || |||| | |||||||||||||||| || || | ||| | || | || | |
Sbjct 5074 TTCAGTCCCATTTTCCATCCGTAAAAATGAATGGACGTTAATTTCCCATAATTGGGTTCA 5133
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
||| || || | | || |||||||| |||||||| || || | ||||| | ||||
Sbjct 5134 GCTACATGAATATTAAACGACTGACTTTGGTCTATAAAAGCTCCACGATCGGCAGACATT 5193
Query 36970 TCTAAAATACATTTTTGA--GATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027
| || | | |||| || || |||||||||||||||||||| | |||||||| ||
Sbjct 5194 TG--AATTTGTGTCTTGACGGAAATTTCCCAAACCGTTTTATATATATTTTTTATATCAT 5251
Query 37028 CTGGTAAAT-CTAAAT-GT-TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGT 37084
|||| | | || ||| || || || |||||||||| | | |||| | ||||| || |
Sbjct 5252 CTGGAATTTGCTCAATAGTCTGTATTGAACCATTATTTGCAATAATTTTGTTCTTCATAT 5311
Query 37085 CATTATTCCACATATTTCTACTTATTAGT----TCTCTCAATAGGTGTGGATTTACAACC 37140
| | || ||| | | | || | | ||| || | | || || |||| |||||
Sbjct 5312 CGTCATCCCATAAA---CCACGT-TCAGTCAAATCCTTGATAAGATGGTGATTAACAACT 5367
Query 37141 TGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGAC 37200
||||| || ||| | || | | |||| | ||| || || || ||||||| | |
Sbjct 5368 TGAAATTCACCACTGAGAACACGACGATTATAAACATTACTTGTGTAAGGTTCAAAGCTC 5427
Query 37201 TCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTA 37260
|||||||||| || || |||| || ||||| || ||||||||||| |||| || |
Sbjct 5428 TCATTATTACCCAAAATCTGAGCAGTTGATGCTGTCGGCATTGGTGCAATTAAGAGTGAA 5487
Query 37261 TTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTT 37320
|||| | ||| | |||||| | | |||||| | | ||||||||| ||||| ||
Sbjct 5488 TTTCGGAGACCAAACTTTTTAATTTTTTCTTTTAGAGCTTCCCAATCCCACAAATCGGTG 5547
Query 37321 GGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATAT 37380
|| |||| ||||||||||||||||| | |||||| | | ||| | | | ||
Sbjct 5548 GGAGTCTTATCCCACATATCATATTGTAATACACCTTTTGACACCGGACATCCATCGTAA 5607
Query 37381 GTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATAT 37440
|||||||| ||||| | || |||| ||| || || || || | ||| |||||||
Sbjct 5608 GTCTCATATGGTCCCAATTGTTCTGCTAATTCACAGCTGGACTCCAATGCACCATAATAA 5667
Query 37441 ATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTC-TTCGCTATCGAAT-GCATAGC 37498
|||||||| || |||||| |||||| |||| ||||| || | | || || |||| |
Sbjct 5668 ATTGTTTCAAATATTTGTTGATTTAAATTTTTCGCTTCGTTAGAT-TCATATGGCAT-TC 5725
Query 37499 CCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCT 37558
|| || ||||| |||| ||||| || ||||| || || || || || | |||| |
Sbjct 5726 TCATCAAAATAAAAGCATCTGCCAATCCTTGAACTCCAATTCCAATAGGACGATGTCTAA 5785
Query 37559 TATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGAT 37618
|| || | | |||| || ||||| ||||| | | || |||||||| | ||
Sbjct 5786 AGTTTGACCGTTTAGCTTCTTCAACGGGATAGTAATTTACGTTAATAATTTTATTCAAAT 5845
Query 37619 TTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA--CATA---AATACG-TTAT 37672
| | | |||||| |||| | |||| |||| || |||| | || || |
Sbjct 5846 TCCTTGTGACTATTTTTGTAACTTCCTTCAATTTGTGAAAGTCATATTCTCTTCGATTTT 5905
Query 37673 TATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGT 37732
|| ||||| || | || | ||| ||| ||| |||||| || ||||||||| || |
Sbjct 5906 GTTTGACAAACATATTTAAAGCAATTGATGCTAAATTACAAACTGCAACTTCA---TCCT 5962
Query 37733 TACT---AAATTGTATAATCTCTGTACAGAGATTACTCGATCTA---ATTGTTCCCAAAT 37786
|||| | |||||| || || ||||| | || |||| | | ||||| || | ||
Sbjct 5963 TACTTGAATATTGTACTATTTCCGTACATAAAT---TCGAACAACGTATTGTCCCAAGAT 6019
Query 37787 TGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTT 37846
| |||||| ||||| || || ||||| ||||| || ||||| || || || ||
Sbjct 6020 TCTGTTGATTTGATTTCCGGTTGCATGAATCCTTATACAGCATATAAGGTGTACCAGTTT 6079
Query 37847 CTATTTGAGCCTCGATAATAGATTTCCATAAA-CTTCTTGCTTTA----ACGATCGCTTT 37901
||| ||||||||| || || | ||| ||| ||| | ||||| |||| | |
Sbjct 6080 CTACTTGAGCCTCAATGATTGCGAACCACAAATCTTGTGCCTTTACTTGACGA---ATAT 6136
Query 37902 AAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATAC--A 37959
| || ||| || ||| || || ||| | ||| ||| || | | || |||
Sbjct 6137 ACCTTCCTTC--TGCTTCATAGCCTTCATAAAGTTTCACAAATTCCT--CACCGTACGAT 6192
Query 37960 TCGCATAATCCTGGAC-ATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTAC 38018
|| | | || |||| | | | |||||||||| ||||| ||||| ||||| ||
Sbjct 6193 TCAAAAAGACCGGGACTACTATTA-GGACACATTAATGACCACATTTCATTGTTTTCAAC 6251
Query 38019 GCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTC 38078
|| ||| || ||||| || | ||| |||||| ||| | ||| | | ||| |||
Sbjct 6252 CCGACGCATGAACAAATCTGGAATCCACAATGCATAAAACATGTCTCTAGCTCTGACTTC 6311
Query 38079 TTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTC 38138
||| || || ||| || |||| ||||| || || |||||| | ||||| |||||
Sbjct 6312 TTCTTTTCCAGTATTTTTCTTTAAATCCAGAAATTCAAAAATATCACCATGCCAAGGTTC 6371
Query 38139 TATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGT 38198
| ||| || | | || ||||| | ||||| || || || | || ||| | | ||
Sbjct 6372 CAAATATATTGCAAACGCGCCTGGACGTTTATTTCCACCTTGGTCAACATAACGTGCGGT 6431
Query 38199 GTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATAT 38258
||||| |||| ||||||||| || || | ||||| || | || ||| |||| | |||
Sbjct 6432 ATTATTGTATACTCTTAACATTGGAACAAGGCCATTTGAAATCCCATTTGTACCAGCTAT 6491
Query 38259 ATAAGTACCCTTAGCTCGTAT--ATTACTTATCGACAATCCTATTCCACCTGCATGTTTT 38316
||| || || || ||||| || | | || ||| || ||||||||||| || |||
Sbjct 6492 ATATGTTCCTTTTGCTCGAATGCAATGAACATTAACA--CCAATTCCACCTGC-TGATTT 6548
Query 38317 G-ATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTAT 38375
| |||||| |||||||||||||| |||||| | ||||| || ||| ||||| ||
Sbjct 6549 GCTTATTAATGCGCATTGTTTTAATGTATCATAAATACCCTCAATAGAATCATCTGACAT 6608
Query 38376 TGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGG 38435
|| ||||| || || || | |||||| ||| ||| | || ||||| || ||
Sbjct 6609 TGATAGTAAGAAGCATGAGGATAATTGAGGGCGTGGCGTTGCAGCTGCGAATAAAGTTGG 6668
Query 38436 AGATGCATG 38444
|||||||||
Sbjct 6669 AGATGCATG 6677
>seq119
Length=197918
Score = 351 bits (388), Expect = 9e-92
Identities = 575/824 (70%), Gaps = 11/824 (1%)
Strand=Plus/Plus
Query 11337 TCTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATAT 11396
||||||||||||||| ||| ||||||||| || || ||||| || || ||||| |||
Sbjct 167156 TCTTTTGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCCCTCAAGTGAAATAA 167215
Query 11397 ACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTA 11456
| |||||||| || ||||| | ||| ||||||| ||| || || || |
Sbjct 167216 ATTCCATAAATGAGAATGGATTTTTGGTATTATAGACTTTATCAAGTCCCAATTCACCCA 167275
Query 11457 ATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAA 11516
|||| ||| || || |||||||| ||||||| ||||||| ||||||||| || | |
Sbjct 167276 ATAAATGATCAGCAACAAATTCTATGTACTGAGTCATTAAATCACAATTCATGCCCAACA 167335
Query 11517 GATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTA 11576
| || |||| || | || ||||| ||||| || || || || || || |||| |
Sbjct 167336 TCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTTACAGCCTCTGTGATAA 167395
Query 11577 T--CGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGC 11634
| | || || |||||| | ||| ||| | |||||| ||||||| || ||
Sbjct 167396 TTTCAAC--TACTCTTTCCTTTGGTGGCTTCTGTTCAAGATGTTTGTACATTAAGCATGC 167453
Query 11635 AAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGG 11694
||| |||| ||| | ||||||||||| || |||||||| |||||||| || || ||
Sbjct 167454 AAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTTGAAAATGTCAACCCTGG 167513
Query 11695 CATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCC 11754
||| ||||||| || || |||||||||||||| ||||| |||| |||||| || ||
Sbjct 167514 CATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTACCACTAAAGAAAATCCC 167573
Query 11755 CTCCACAGCTGCAAATGCTACTACTCTTTCTCCA---TATACCTTGTTGCTAGATATCCA 11811
|| ||||||||||| || | |||| ||| ||| | | | || ||||| ||||||||
Sbjct 167574 TTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCATTCTTGCTGGATATCCA 167633
Query 11812 TTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA 11871
||| ||||| ||||| ||||| || || ||| | ||| || || || || |||||
Sbjct 167634 ATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTCTCAATTGCATTGAATAA 167693
Query 11872 ATGCATTTTTTCTATATT--ATCTCTTACATATGTATCTATTAATAAACTATACATTTCT 11929
| | | || || |||||| | ||| || || ||||||| ||||| ||
Sbjct 167694 --GAAGTCACGCTGCTTTGCATCTCTAATATAAGTTTCAATTAATATTGAGTACATCTCC 167751
Query 11930 GAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGT 11989
|| || | |||||||||||| ||||| ||||||||||| |||| || |||| | ||
Sbjct 167752 GAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGAGCTTCTGGAACTTGA 167811
Query 11990 ACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAA 12049
|| ||| | || | || ||||||||||||||| || |||||| | |||||
Sbjct 167812 ACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCATCAGATGCAGCAAAG 167871
Query 12050 AATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCATCT 12109
|| |||| || ||| ||||| | || | | | || | ||| || ||
Sbjct 167872 AAAGCTAATACATGCGAGATAAAATGACGCTCTGAATCCTTGAGATTGTTCCAGTCTTCC 167931
Query 12110 AAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGC 12153
| ||||||||||||||| ||||| || || ||||| || || ||
Sbjct 167932 ATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAAGCTGGC 167975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468372383026000
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