Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq343 518 5e-142
seq119 291 1e-73
>seq343
Length=103200
Score = 518 bits (574), Expect = 5e-142
Identities = 1071/1576 (68%), Gaps = 37/1576 (2%)
Strand=Plus/Plus
Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798
|||||||| || |||| || |||||||| ||||| || || | |||||||||| |||
Sbjct 5041 GCGGGTTTTGTTCGTAAGTAATACATTCCAGTTTTCAGTCCCATTTTCCATCCGTAAAAA 5100
Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858
|| || ||||| ||| |||| | || || |||| ||| ||||| | || ||||||
Sbjct 5101 TGAATGGACGTTAATTTCCCATAATTGGGTTCAGCTACATGAATATTAAACGACTGACTT 5160
Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918
|| || || || ||||| | || |||| ||||| || ||||| | |||||||
Sbjct 5161 TGGTCTATAAAAGCTCCACGATCGGCAGACATTTGAATTTGTGTCTTGACGGAAATTTCC 5220
Query 78919 CAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-----TATTCTGAATGG 78973
|||| |||||||| | || ||||| ||||||| |||| || |||| || |
Sbjct 5221 CAAACCGTTTTATATATATTTTTTATATCATCTGGAA--TTTGCTCAATAGTCTGTATTG 5278
Query 78974 ATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTA 79033
| ||| || ||| ||||| | ||||| || || |||| |||||| | || || |
Sbjct 5279 AACCATTATTTGCAATAATTTTGTTCTTCATATCGTCATCCCATAAACCACGTTCAGTCA 5338
Query 79034 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 79093
|| | | | ||||| ||||||| ||||||||||| ||| | || | ||| | |
Sbjct 5339 AATCCTTGATAAGATGGTGATTAACAACTTGAAATTCACCACTGAGAACACGACGATTAT 5398
Query 79094 AAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATG 79153
||| |||||| || || ||||| | |||||||| |||||||| |||||||||||||
Sbjct 5399 AAACATTACTTGTGTAAGGTTCAAAGCTCTCATTATTACCCAAAATCTGAGCAGTTGATG 5458
Query 79154 CCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTT 79213
| || ||||| ||||| | || | ||||| ||||| | | | ||||| ||||
Sbjct 5459 CTGTCGGCATTGGTGCAATTAAGAGTGAATTTCGGAGACCAAACTTTTTAATTTTTTCTT 5518
Query 79214 TTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAA 79273
|||||| |||||||||||| | ||| | || || ||| | ||||||||||| |
Sbjct 5519 TTAGAGCTTCCCAATCCCACAAATCGGTGGGAGTCTTATCCCACATATCATATTGTAATA 5578
Query 79274 TACCGTT--ACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAA 79331
||| || || | || | |||| ||| || ||||| ||||| | ||| |||||
Sbjct 5579 CACCTTTTGAC-ACCGGA-CATCCATCGTAAGTCTCATATGGTCCCAATTGTTCTGCTAA 5636
Query 79332 TTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATC 79391
|||||| || | ||| ||||| || |||||||| ||||| || || | | ||| | ||
Sbjct 5637 TTCACAGCTGGACTCCAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTTAAATT 5696
Query 79392 TTGTGCTTC-TAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTT 79450
|| ||||| | | | ||| |||| | | | |||||| || ||||| |||||||
Sbjct 5697 TTTCGCTTCGTTAGAT-TCATATGGCATTCTCATCAAAATAAAAGCATCTGCCAATCCTT 5755
Query 79451 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGAT 79510
|||| ||||| || ||||| | |||||| || || || ||||||| || ||||
Sbjct 5756 GAACTCCAATTCCAATAGGACGATGTCTAAAGTTTGACCGTTTAGCTTCTTCAACGGGAT 5815
Query 79511 AATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCT 79567
| ||||| | | ||||||||||| | ||||| |||||||| |||| || ||||
Sbjct 5816 AGTAATTTACGTTAATAATTTTATTCAAATTCCTTGTGACTATT--TTTG-TAACTTCCT 5872
Query 79568 TTAGTTTGAGAAAATCAAA---TCGTCCA---TCTATTACAAACATGTTCAACGCGACAG 79621
| | |||| |||| ||| | || || | | | | |||||||| || || || | |
Sbjct 5873 TCAATTTGTGAAAGTCATATTCTCTTCGATTTTGTTTGACAAACATATTTAAAGCAATTG 5932
Query 79622 ATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGA 79681
|||| | ||||||||| || || |||| | | |||||||| |||||| || || |
Sbjct 5933 ATGCTAAATTACAAACTGCAACTTCATCCTTACTTGAATATTGTACTATTTCCGTACATA 5992
Query 79682 GGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCT 79741
|| ||| || || || | ||| |||||||| || ||| || | |||||
Sbjct 5993 AATTCGAACAACGTATTGTCCCAAGATTCTGTTGATTTGATTTCCGGTTGCATGAATCCT 6052
Query 79742 TATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA 79801
|||| || || | || ||||||||||| | |||| || || || || ||| |
Sbjct 6053 TATACAGCATATAAGGTGTACCAGTTTCTACTTGAGCCTCAATGATTGCGAACCACAAAT 6112
Query 79802 CTCGAGCCTTTATTATAGACTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCG 79859
|| | ||||||| | ||| ||| ||| |||| ||| || | ||| | |
Sbjct 6113 CTTGTGCCTTTA--CTTGACGAATATACCTTCCTTCTGCTTCATAGCCTTCATAAAGTTT 6170
Query 79860 TTCGAACTCGTCTCCCCAAAC-ATCGTCTAA---TCCAGGACATTCGTCAGGACACATCA 79915
| || || ||| || || || || || || |||| | ||||||||| |
Sbjct 6171 CACAAATTC--CTCACCGTACGAT--TCAAAAAGACCGGGACTACTATTAGGACACATTA 6226
Query 79916 ACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 79975
| |||||| | ||| | | || || ||| || | ||| |||||||| | ||
Sbjct 6227 ATGACCACATTTCATTGTTTTCAACCCGACGCATGAACAAATCTGGAATCCACAATGCAT 6286
Query 79976 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035
||| | ||||| | ||| || || ||||| ||||| || || | ||| || ||
Sbjct 6287 AAAACATGTCTCTAGCTCTGACTTCTTCTTTTCCAGTATTTTTCTTTAAATCCAGAAATT 6346
Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095
| | ||||||| |||||| |||||||| ||||| || | | || || ||||| ||||
Sbjct 6347 CAAAAATATCACCATGCCAAGGTTCCAAATATATTGCAAACGCGCCTGGACGTTTATTTC 6406
Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155
| || || || | || | ||||| ||||| || ||||| |||||||||| || ||||
Sbjct 6407 CACCTTGGTCAACATAACGTGCGGTATTATTGTATACTCTTAACATTGGAACAAGGCCAT 6466
Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATA 80215
| || | ||||| || || | ||||| |||| | || ||||| | || |
Sbjct 6467 TTGAAATCCCATTTGTACCAGCTATATATGTTCCTTTTGCTCGAATGCAATGAACATTAA 6526
Query 80216 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 80275
||| ||||| ||||| ||| |||||||||||| ||||||| |||||||| || |
Sbjct 6527 CACCAATTCCACCTGCTGATTTGCTTATTAATGCGCATTGTTTTAATGTATCATAAATAC 6586
Query 80276 CCTCTATGCTATCATC 80291
|||| || ||||||
Sbjct 6587 CCTCAATAGAATCATC 6602
>seq119
Length=197918
Score = 291 bits (322), Expect = 1e-73
Identities = 572/835 (69%), Gaps = 17/835 (2%)
Strand=Plus/Plus
Query 49653 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 49712
|||||||||||| | ||||| |||||||| || | |||||| || || || || ||
Sbjct 167142 AGACATAACTCCACTCTTTTGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCC 167201
Query 49713 TTCCAATGATATATTTTCCATGAAATCA-AACGGATTGGTAACATTATAAAtttttttAA 49771
|| | ||| ||| |||||| |||| | || ||||| | |||||| | ||| | ||
Sbjct 167202 CTCAAGTGAAATAAATTCCAT-AAATGAGAATGGATTTTTGGTATTATAGACTTTATCAA 167260
Query 49772 ATCCCAATTCA-GAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCA 49830
|||||||||| ||| ||| ||| || ||||||||||| || |||| | |||
Sbjct 167261 GTCCCAATTCACCCAATAAAT-GATCAGCAACAAATTCTATGTACTGAGTCATTAAATCA 167319
Query 49831 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGAT 49890
|||||||| || | | ||||||||||| || |||| | |||||| | ||||| |
Sbjct 167320 CAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTT 167379
Query 49891 ACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGT 49947
|| || ||||| ||||| | ||| | ||| | ||||| | | | | ||||
Sbjct 167380 ACAGCCTCTGTGATAAT---TTCAACTACTCTTTCCTTTGGTGGCTTCTGTTCAAGATGT 167436
Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007
|| |||| || ||||| || || | || || || |||||||| ||| ||||| ||
Sbjct 167437 TTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTT 167496
Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067
||||| || | || ||||||| || | ||| |||| ||||||||| | |||||
Sbjct 167497 GAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTA 167556
Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127
||| |||||| || ||||| || || ||||| |||| || || || ||| | | ||
Sbjct 167557 CCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCA 167616
Query 50128 CT-GTCATG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 50184
| | || |||||| ||| |||||| || |||||||| || ||||| || | ||
Sbjct 167617 TTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTC 167676
Query 50185 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 50244
|| || ||||| || | ||| | || |||| ||| |||||| || || ||
Sbjct 167677 TCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCTAATATAAGTTTCAATTAAT 167736
Query 50245 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 50304
| ||||| ||||| || | ||||| || || || || ||||| ||||| ||| |
Sbjct 167737 ATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGA 167796
Query 50305 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCG 50364
|| || | || || ||||| || || || ||| |||||| ||||| || || ||
Sbjct 167797 GCTTCTGGAACTTGAACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCA 167856
Query 50365 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGT--GTTA 50422
||| || ||||| || || |||||||| |||||||| || || | | |
Sbjct 167857 TCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTC--TGAATCCTTGA 167914
Query 50423 GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAA 50477
| || ||||| || | |||||||| |||| ||| ||||| || |||||||| ||
Sbjct 167915 GATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAA 167969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718035138181000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |