Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq119 370 1e-97
seq205 93.3 4e-14
>seq119
Length=197918
Score = 370 bits (410), Expect = 1e-97
Identities = 636/918 (69%), Gaps = 14/918 (2%)
Strand=Plus/Plus
Query 13496 ATTCAACTTTATAATATTCAATAAAAA------CTAAAAATCAACATCTAATGAAAAAAC 13549
||||| ||||| || || |||| ||| ||| |||||| | ||||||| |||||
Sbjct 167069 ATTCA--TTTATGATGTTAAATAGAAATTATCACTAGAAATCAGCGTCTAATGTGAAAAC 167126
Query 13550 ATTATCGTCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAA 13609
| || | |||| ||||| || | ||||||||||||| ||| || ||| ||
Sbjct 167127 TTGTTCTTGACGACTAGACATAACTCCACTCTTTTGATATTCACCAACCTTTCGTTCGAA 167186
Query 13610 GAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACAT 13669
|||||| || || || || ||||| ||| ||||||||| ||||||||| | | |
Sbjct 167187 GAAGTTTGTCTTGCCCTCAAGTGAAATAAATTCCATAAATGAGAATGGATTTTTGGTATT 167246
Query 13670 AAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTG 13729
| | ||||||||| || | ||| | ||| |||||||| ||| || || || ||
Sbjct 167247 ATAGACTTTATCAAGTCCCAATTCACCCAATAAATGATCAGCAACAAATTCTATGTACTG 167306
Query 13730 AGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTC 13789
|| |||||||||||||||||| || | | || || |||| | | |||||||||||
Sbjct 167307 AGTCATTAAATCACAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTC 167366
Query 13790 TTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCT--CATTAGAAGGAGGA 13847
|| || || ||||||||| | ||||| || | || ||| | || | ||
Sbjct 167367 CTTCTCAATTTTTACAGCCTCTGTGATAAT--TTCAACTACTCTTTCCTTTGGTGGCTTC 167424
Query 13848 TATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTA 13907
| || |||||||| | ||||| || ||||| |||| |||||| || || ||||| |
Sbjct 167425 TGTTCAAGATGTTTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAA 167484
Query 13908 ATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATT 13967
|||||||| ||||||||||| || |||||||| ||||||| || || | |||||||||
Sbjct 167485 ATAAGTTCATTTGAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATA 167544
Query 13968 GCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCT 14027
|| ||||| || |||||| || || || || || ||||| || || | ||||||
Sbjct 167545 GCTGCAAAGCTACCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCA 167604
Query 14028 CCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATA 14087
||||| ||| || ||| | |||||||| ||| |||||| |||| || || |||| |
Sbjct 167605 CCAAAGTTTGCATTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACA 167664
Query 14088 AAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTAT 14147
| | ||| ||||| ||||| ||||| | || || || | | | ||| ||
Sbjct 167665 CATGGAAGTGTCTCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCTAATATAA 167724
Query 14148 GTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCA 14207
|| ||||| | || ||||| || ||||||| ||||||||||| || || || |||
Sbjct 167725 GTTTCAATTAATATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCA 167784
Query 14208 TAAAAGCATCTAGCTTCCGACCATTGTACTTCC-GAGTAAAATCTTTCGGCCAAATTTTC 14266
|| ||| ||| |||||| | ||| |||||| || | ||| | || ||||| ||
Sbjct 167785 TAGAAGAATCGAGCTTCTGGAACTTGAACTTCCTGACTGAAA-CGCTCAATTAAATTCTC 167843
Query 14267 ATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC 14326
||| || || |||||| || ||||| || || |||| | ||||| | ||||
Sbjct 167844 ATTTACGATGCCATCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTC 167903
Query 14327 TTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGT 14386
| || ||||| || ||||| || | ||| || || | ||| ||||| || |||||
Sbjct 167904 TGAATCCTTGAGATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGT 167963
Query 14387 CCAAAAACTAGCGACAGC 14404
||| || || || ||||
Sbjct 167964 CCAGAAGCTGGCTTCAGC 167981
>seq205
Length=143123
Score = 93.3 bits (102), Expect = 4e-14
Identities = 126/173 (73%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 13877 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 13936
||| |||| ||| || || ||||||| ||| |||||||||||||| || ||||| ||
Sbjct 86382 AAAGTCACGATGTAGTCCTTCATCTCGTGAAATGAGTTCGTTTGAAAAAGTCAATCCAGG 86323
Query 13937 CATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG-GAAAAGAATATTC 13995
||| | |||||| ||||||| | |||| ||||| ||||| | | |||| |||||
Sbjct 86322 CATTAGTCCTCGCTTTTTTAGCTAAAAGATTGCTGCAAAGCTTCTGCTAAAAAAATATAA 86263
Query 13996 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14048
|| || || ||||| || || | || ||| || || ||| ||||| |||
Sbjct 86262 TTTCTACAGCGGCAAATGCAATAATTCTTTCACCCAA-TCTGCCTTTTTCTTC 86211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479571938485000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |