Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq119 356 2e-93
seq205 91.5 1e-13
>seq119
Length=197918
Score = 356 bits (394), Expect = 2e-93
Identities = 633/919 (69%), Gaps = 16/919 (2%)
Strand=Plus/Plus
Query 13284 ATTCAACTTTATAATATTTAATAAAAA------CTAAAAATCAACATCTAATGAAAAAAC 13337
||||| ||||| || || |||| ||| ||| |||||| | ||||||| |||||
Sbjct 167069 ATTCA--TTTATGATGTTAAATAGAAATTATCACTAGAAATCAGCGTCTAATGTGAAAAC 167126
Query 13338 ATTATCGTCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAA 13397
| || | |||| ||||| || | ||||||||||||| ||| || ||| ||
Sbjct 167127 TTGTTCTTGACGACTAGACATAACTCCACTCTTTTGATATTCACCAACCTTTCGTTCGAA 167186
Query 13398 AAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACAT 13457
||||| || || || || ||||| ||| ||||||||| |||||||||| | | |
Sbjct 167187 GAAGTTTGTCTTGCCCTCAAGTGAAATAAATTCCATAAATGAGAATGGATTTTTGGTATT 167246
Query 13458 AAACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTG 13517
| | ||||||||| || | ||| ||||| |||||||| ||| || || || ||
Sbjct 167247 ATAGACTTTATCAAGTCCCAATTCACCCAATAAATGATCAGCAACAAATTCTATGTACTG 167306
Query 13518 AGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTC 13577
|| |||||||||||||||||| || | | || || |||| | | ||||||||||||
Sbjct 167307 AGTCATTAAATCACAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTC 167366
Query 13578 TTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAA---TGTCATTAGAAGGAGG 13634
|| || || |||||||| | | ||||| | || | | || || | ||
Sbjct 167367 CTTCTCAATTTTTACAGCCTC---TGTGATAATTTCAACTACTCTTTCCTTTGGTGGCTT 167423
Query 13635 ATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACT 13694
| || |||||||| | ||||| || ||||| |||| |||||| || || |||||
Sbjct 167424 CTGTTCAAGATGTTTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGA 167483
Query 13695 AATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATAT 13754
||||||||| ||||||||||| || |||||||| ||||||| || || | |||||||||
Sbjct 167484 AATAAGTTCATTTGAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATAT 167543
Query 13755 TGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTC 13814
|| || || || |||||| || || || || || ||||| || || | ||||||
Sbjct 167544 AGCTGCAAAGCTACCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTC 167603
Query 13815 TCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAAT 13874
||||| ||| || ||| | |||||||| ||| |||||| |||| || || ||||
Sbjct 167604 ACCAAAGTTTGCATTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAAC 167663
Query 13875 AAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTA 13934
| | | ||| || |||||||||||||| || || || | | | ||| ||
Sbjct 167664 ACATGGAAGTGTCTCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCTAATATA 167723
Query 13935 TGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACC 13994
|| ||||| | || ||||| || ||||||| ||||| ||||| || || || ||
Sbjct 167724 AGTTTCAATTAATATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCC 167783
Query 13995 ATAAAAACATCTAGCTTCTGACCATTGTACCTCC-GAGTAAAATCTTTCTGCCAAGTTTT 14053
||| || ||| |||||||| ||| || ||| || | ||| | || || || |
Sbjct 167784 ATAGAAGAATCGAGCTTCTGGAACTTGAACTTCCTGACTGAAA-CGCTCAATTAAATTCT 167842
Query 14054 CATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCT 14113
|||| || || |||||| || ||||| || || |||| | ||||| | |||
Sbjct 167843 CATTTACGATGCCATCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCT 167902
Query 14114 CTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTG 14173
|| || ||||| || ||||| || | | ||| || || | ||| ||||| || ||||
Sbjct 167903 CTGAATCCTTGAGATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTG 167962
Query 14174 TCCAAAAACTAGCGACAGC 14192
|||| || || || ||||
Sbjct 167963 TCCAGAAGCTGGCTTCAGC 167981
>seq205
Length=143123
Score = 91.5 bits (100), Expect = 1e-13
Identities = 125/172 (73%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 13665 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 13724
||| |||| ||| || || ||||||| ||| |||||||||||||| || ||||| ||
Sbjct 86382 AAAGTCACGATGTAGTCCTTCATCTCGTGAAATGAGTTCGTTTGAAAAAGTCAATCCAGG 86323
Query 13725 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG-GAAAAGAATATTC 13783
||| | |||||| ||||||| | |||| ||||| || || || | |||| |||||
Sbjct 86322 CATTAGTCCTCGCTTTTTTAGCTAAAAGATTGCTGCAAAGCTTCTGCTAAAAAAATATAA 86263
Query 13784 CCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTT 13835
|| || || ||||| || || | || ||| || || ||| ||||| ||
Sbjct 86262 TTTCTACAGCGGCAAATGCAATAATTCTTTCACCCAA-TCTGCCTTTTTCTT 86212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478433109081000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |