Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq343 491 6e-134
seq119 260 2e-64
>seq343
Length=103200
Score = 491 bits (544), Expect = 6e-134
Identities = 1080/1608 (67%), Gaps = 41/1608 (3%)
Strand=Plus/Plus
Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCT 70851
||||| | ||||||||||| | | | |||| ||| || |||| || ||||| ||
Sbjct 5011 TTGTCAACAGTAAACTGAATAGCATTTGCAGCGGGTTTTGTTCGTAAGTAATACATTCCA 5070
Query 70852 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGA 70911
||||| || || | |||||||||||||||| || ||||| ||| ||| | ||
Sbjct 5071 GTTTTCAGTCCCATTTTCCATCCGTAAAAATGAATGGACGTTAATTTCCCATAATTGGGT 5130
Query 70912 TCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 70971
|| |||| |||||||| | |||||||||||| || || || ||||| | || |||| |
Sbjct 5131 TCAGCTACATGAATATTAAACGACTGACTTTGGTCTATAAAAGCTCCACGATCGGCAGAC 5190
Query 70972 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 71031
|||| || ||||| | ||||||||||| |||||||| | || |||||
Sbjct 5191 ATTTGAATTTGTGTCTTGACGGAAATTTCCCAAACCGTTTTATATATATTTTTTATATCA 5250
Query 71032 TCTGGAAGGTTTG-----TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGA 71086
||||||| |||| || |||| || || ||| || ||||||||| | || || |
Sbjct 5251 TCTGGAA--TTTGCTCAATAGTCTGTATTGAACCATTATTTGCAATAATTTTGTTCTTCA 5308
Query 71087 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTT 71146
| || |||| |||||| | || || ||| | | | ||||| ||||||| ||||
Sbjct 5309 TATCGTCATCCCATAAACCACGTTCAGTCAAATCCTTGATAAGATGGTGATTAACAACTT 5368
Query 71147 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACT 71206
||||||| ||| | || | |||| | |||| |||||| || || ||||| | ||
Sbjct 5369 GAAATTCACCACTGAGAACACGACGATTATAAACATTACTTGTGTAAGGTTCAAAGCTCT 5428
Query 71207 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTAT 71266
||||||| |||||||| |||||||||||||| |||||||| ||||| | || || ||
Sbjct 5429 CATTATTACCCAAAATCTGAGCAGTTGATGCTGTCGGCATTGGTGCAATTAAGAGTGAAT 5488
Query 71267 TTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATG 71326
||| |||||| | ||||| |||||||||| |||||||| ||| | || || ||
Sbjct 5489 TTCGGAGACCAAACTTTTTAATTTTTTCTTTTAGAGCTTCCCAATCCCACAAAT-CGGTG 5547
Query 71327 GTACAACNNNNNNNNNNNNNNNNNNNNNNATGC-CGTT---ACTAGCGTATGATCCTGCA 71382
| | | || | | || || | || | |||| |
Sbjct 5548 GGA-GTCTTATCCCACATATCATATTGTAATACACCTTTTGAC-ACCGGA-CATCCATCG 5604
Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442
|| || || |||||||| || ||| |||| |||||| || | ||| ||||| ||||||
Sbjct 5605 TAAGTCTCATATGGTCCCAATTGTTCTGCTAATTCACAGCTGGACTCCAATGCACCATAA 5664
Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTA---TCAAATGGA 71499
||||| ||||| || || | | ||| | || || ||||| | || ||| ||||
Sbjct 5665 TAAATTGTTTCAAATATTTGTTGATTTAAATTTTTCGCTTC---GTTAGATTCATATGGC 5721
Query 71500 TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGT 71559
| | | |||||| || ||||| ||||||||||| ||||| || ||||| | |||
Sbjct 5722 ATTCTCATCAAAATAAAAGCATCTGCCAATCCTTGAACTCCAATTCCAATAGGACGATGT 5781
Query 71560 CTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 71619
|| || || || ||||||| || ||||| ||||| | | |||||||||||
Sbjct 5782 CTAAAGTTTGACCGTTTAGCTTCTTCAACGGGATAGTAATTTACGTTAATAATTTTATTC 5841
Query 71620 AGAT---TTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCA 71676
| || || |||||||| |||| || ||||| | |||| |||| ||| || || |
Sbjct 5842 AAATTCCTTGTGACTATT--TTTG-TAACTTCCTTCAATTTGTGAAAGTCATAT-TCTCT 5897
Query 71677 TCTATT-------ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 71729
|| ||| ||||||| || || |||| ||||| | ||||||||| || || ||
Sbjct 5898 TCGATTTTGTTTGACAAACATATTTAAAGCAATTGATGCTAAATTACAAACTGCAACTTC 5957
Query 71730 ATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 71789
|| | | |||||||| ||||| || || | ||| ||| || || || |
Sbjct 5958 ATCCTTACTTGAATATTGTACTATTTCCGTACATAAATTCGAACAACGTATTGTCCCAAG 6017
Query 71790 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGT 71849
||| |||||||| || ||| || | ||||||||| || ||| | || ||||||||
Sbjct 6018 ATTCTGTTGATTTGATTTCCGGTTGCATGAATCCTTATACAGCATATAAGGTGTACCAGT 6077
Query 71850 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTA 71909
||| | |||| || || || || ||| | || | ||||||| | | | ||
Sbjct 6078 TTCTACTTGAGCCTCAATGATTGCGAACCACAAATCTTGTGCCTTTACTTGACGAATATA 6137
Query 71910 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969
|| |||| ||| || | ||| | | | || || || || | | |||
Sbjct 6138 CCTTCCTTCTGCTTCATAGCCTTCATAAAGTTTCACAAATTCCTCACCGTACG-ATTCAA 6196
Query 71970 TAA-TCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTT 72028
|| || |||| ||| |||||||| ||||||||| | ||| | | || ||
Sbjct 6197 AAAGACCGGGACTACTATTAGGACACATTAATGACCACATTTCATTGTTTTCAACCCGAC 6256
Query 72029 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT 72088
||| || | ||| |||||||| | || ||| | ||||| | ||| || || |
Sbjct 6257 GCATGAACAAATCTGGAATCCACAATGCATAAAACATGTCTCTAGCTCTGACTTCTTCTT 6316
Query 72089 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 72148
|||| ||||| || || | ||| || || | | ||||||| |||||| |||||||| |
Sbjct 6317 TTCCAGTATTTTTCTTTAAATCCAGAAATTCAAAAATATCACCATGCCAAGGTTCCAAAT 6376
Query 72149 ATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 72208
|||| || | | || || ||||| ||||| || || || | || | ||||| ||||
Sbjct 6377 ATATTGCAAACGCGCCTGGACGTTTATTTCCACCTTGGTCAACATAACGTGCGGTATTAT 6436
Query 72209 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 72268
| || ||||| |||||||||| || ||||| || ||||| || || | |||||
Sbjct 6437 TGTATACTCTTAACATTGGAACAAGGCCATTTGAAATCCCATTTGTACCAGCTATATATG 6496
Query 72269 TTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 72326
|||| | || ||||| | || ||| | ||| ||||| ||||| ||| ||
Sbjct 6497 TTCCTTTTGCTCGAATGCAATGAACATT--AACACCAATTCCACCTGCTGATTTGCTTAT 6554
Query 72327 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 72374
|||||||||| ||||||| |||||||| || ||||| ||| ||||||
Sbjct 6555 TAATGCGCATTGTTTTAATGTATCATAAATACCCTCAATAGAATCATC 6602
>seq119
Length=197918
Score = 260 bits (288), Expect = 2e-64
Identities = 574/850 (68%), Gaps = 19/850 (2%)
Strand=Plus/Plus
Query 41758 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCC 41817
|||||||||||| | ||||| |||||||| || | |||||| || || ||||| ||
Sbjct 167142 AGACATAACTCCACTCTTTTGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCC 167201
Query 41818 TTCCAATGATATATTTTCCATGAAATCA-AACGGATTGGTAACATTATAAAtttttttAA 41876
|| | ||| ||| |||||| |||| | || ||||| | |||||| | ||| | ||
Sbjct 167202 CTCAAGTGAAATAAATTCCAT-AAATGAGAATGGATTTTTGGTATTATAGACTTTATCAA 167260
Query 41877 ATCCCAATTCA-GAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCA 41935
|||||||||| ||| ||| ||| || | |||||||| || |||| | |||
Sbjct 167261 GTCCCAATTCACCCAATAAAT-GATCAGCAACAAATTCTATGTACTGAGTCATTAAATCA 167319
Query 41936 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAG 41995
|||||||| || | | ||||||||||| || |||| | |||||| | |||||
Sbjct 167320 CAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTT 167379
Query 41996 ACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT---AAATGT 42052
|| || ||||| ||||| |||| |||| | | ||||| | | | | ||||
Sbjct 167380 ACAGCCTCTGTGATAATTTCAACTACTCTTTCCT---TTGGTGGCTTCTGTTCAAGATGT 167436
Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112
|| |||| || ||||| || || | || || || || ||||| ||| | ||| ||
Sbjct 167437 TTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTT 167496
Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172
||||| || | || ||||||| || | ||| |||| ||||||||||| |||||
Sbjct 167497 GAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTA 167556
Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232
||| |||||| || ||||| || || ||||| ||||||| || || ||| | |||
Sbjct 167557 CCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCA 167616
Query 42233 CT-GTCATG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 42289
| | || |||||| ||| |||||| || |||||||| || ||||| || | ||
Sbjct 167617 TTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTC 167676
Query 42290 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAA 42349
|| || ||||| || | ||| | || |||| ||| ||| || || || ||
Sbjct 167677 TCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCTAATATAAGTTTCAATTAAT 167736
Query 42350 AGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTG 42409
| ||||| || || || | ||||| || || || || ||||| ||||| |||
Sbjct 167737 ATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGA 167796
Query 42410 GCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCG 42469
|| || | ||| || ||||| || || || ||| |||||| || || || || ||
Sbjct 167797 GCTTCTGGAACTTGAACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCA 167856
Query 42470 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT---ATTTTTCGTCCGGTGTT 42526
||| || ||||| || || |||||||| ||||||| | | ||| |
Sbjct 167857 TCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTCTGAATCC---TTG 167913
Query 42527 AATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGAT 42586
| || ||||| || | |||||||| |||| ||| ||||| || || ||||| ||
Sbjct 167914 AGATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAAGCTG 167973
Query 42587 GCTTCTGCCT 42596
||||| ||||
Sbjct 167974 GCTTCAGCCT 167983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670920870029000
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