Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq296 116 4e-21
>seq296
Length=113092
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | ||| | ||| ||||| | |||||||||||| || || ||||| ||||||
Sbjct 112857 CCTCCACGAAGACGAAGAACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTC 112916
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||| | |||||| || || |||||| ||| || || || || ||
Sbjct 112917 AATGTACGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGA 112976
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || ||| |||| | ||| | ||||| | || || |||
Sbjct 112977 ATTCCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTCAACT 113036
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | || || || ||||| || || ||||| ||||||||
Sbjct 113037 TCTAATGTGATGGTTTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506849461878000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |