Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq767 167 3e-36
seq6386 163 4e-35
seq343 109 8e-19
seq119 109 8e-19
>seq767
Length=55330
Score = 167 bits (184), Expect = 3e-36
Identities = 383/570 (67%), Gaps = 14/570 (2%)
Strand=Plus/Plus
Query 70061 CAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTAT 70120
|||| || ||| |||| ||||| || ||||| |||||| | || | || |||| |||
Sbjct 37569 CAAGTTGGTGATTTGGGTCCAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATAT 37628
Query 70121 GTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGAC 70180
| ||||| || ||| || || || |||| ||||| || |||||||
Sbjct 37629 AAAACATGCGATGATGAATATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGA- 37687
Query 70181 ACTC-TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGA 70239
|| | |||| ||||||||| ||| | | || || || || |||||||||| | ||
Sbjct 37688 ACGCATCAAAGCCAATCCAAATGATCGTCGTATTATATTGAGCGCATGGAATCCAGTGGA 37747
Query 70240 TTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTA-CTCG-TACGAT 70297
| | ||||||||||| ||||| ||||||||| | | ||| ||||| ||| || ||
Sbjct 37748 CATTCCACAAATGGCACTTCCACCATGTCACTGTCTCGTTCAATTTTATGTCGCTA--AT 37805
Query 70298 GGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTT 70357
|| ||||| ||| | | || || || || || ||||| || || || || ||
Sbjct 37806 GGTGAATTGAGCTGCCAATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTC 37865
Query 70358 AACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCG 70417
|| |||||| ||| | | |||||| ||||||||||||| |||| |||| |
Sbjct 37866 AATATTGCATCGTATGCCTTATTGACGTACATGATTGCTCATGTTACAAATTTGAAGCCT 37925
Query 70418 CACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTA----AATCACATCGAGCC 70473
|| || || || || ||||||| ||||| |||||| ||||||| |||||
Sbjct 37926 GGTGATTTTGTTCATACTTTTGGCGATGCTCA----TATTTACACGAATCACACTGAGCC 37981
Query 70474 ATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAA 70533
||| || | |||||||||||| |||| | || || || || || | | ||| |
Sbjct 37982 ATTGAAAGAGCAACTCGAACGTAAGCCACGTCCATTCCCACAGTTGAAAATCAAGCGTCA 38041
Query 70534 AGTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATA 70593
|||| ||||| || |||||||| ||||||||| | | | || || ||||| ||
Sbjct 38042 AGTTTCTAATATCGATGATTTTAAGTTTGAAGATTTTGAAGTCATTGGATATGATCCGTA 38101
Query 70594 CCCTAAGATTCCCATGGTTCTGGCTGTTTA 70623
|| ||| |||| ||||||||||
Sbjct 38102 TCCACCTATTAAAATGGAAATGGCTGTTTA 38131
>seq6386
Length=10331
Score = 163 bits (180), Expect = 4e-35
Identities = 383/572 (67%), Gaps = 16/572 (3%)
Strand=Plus/Minus
Query 127101 TTTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGT 127160
||| | ||| || ||||| ||||||| |||||||| | ||||| || || || ||||
Sbjct 9001 TTTTCTGTAGAAAATGACACCGGCTCTTGGACCTCTTAATGTCTTATGAGTAGTTGTGGA 8942
Query 127161 CACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAG-CCCGCAA 127219
|||| ||| |||| ||||| || ||||||||||| | |||| |||| || | ||
Sbjct 8941 TACAACATCAGAATATTCAAAAGGTGATGGAATGACTTTAGCAGCAA-CAAGACCAGAAA 8883
Query 127220 TGTGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTC 127279
||||||| ||||| | | || | | | ||| ||||| || ||||||||
Sbjct 8882 TGTGTGCCATATCAGAAAATAGATATGCATTATTTTGATCTGCAATTTCACGGAATCGCT 8823
Query 127280 TATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATA 127339
|||| ||||||| ||| || ||| | || || || || | | || |||||||
Sbjct 8822 TATAATCCAAGCATCGACTGTAACAAGACATTCCAGCGATAATAATTTTTGGCTTGAATA 8763
Query 127340 GATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGT 127399
|| ||| ||| | | |||| |||| |||| ||| |||||| || ||| || || |
Sbjct 8762 ATTTTGCAGACTCTTCTAATTTGCCATAATCGATGAGACCAGTCGCAGCATCAACTTTAT 8703
Query 127400 ACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGA----CACGT-TGCGG-------AATC 127447
| ||||| ||| || || | |||||||| || | | | | || ||||
Sbjct 8702 AAGGCATAGATTCAAAGAAAATGGATGTAGCTGAAATTCTCTTATTTGGAGTCATAAATC 8643
Query 127448 CGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAA 127507
|||| || | || || || ||||| ||||| |||||||| |||||| | || || | ||
Sbjct 8642 CGTGAGTTAAATGACCACCATCGGGAAGATCAAGTCCCATAATTCTATCATGTGGCTGAA 8583
Query 127508 CGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTC 127567
| | | || || || || || || || ||| || || || || || ||| ||||
Sbjct 8582 TCAGTGCTGTATAGACAGCGAAATTTGCAGGCGATCCAGAATAAGGCTGAACATTTACTC 8523
Query 127568 CCCATTCGGACTCGTTCAAATTGA-ACGCTCTGAGACATCGCTGCTGTGCTAGCAGTTCG 127626
||||||| || | | ||| | | ||| | ||| || ||||| || | |||
Sbjct 8522 CCCATTC-TTCTGGATTTAATCCATAAGCTTCCAATGATCTCTTTTGTGCGAGAATTTCA 8464
Query 127627 ATGCGATCGATAAACTCGTTACCACCATAGTA 127658
|| |||||| |||| ||||||||||||||
Sbjct 8463 ATTTCATCGATGAACTGATTACCACCATAGTA 8432
>seq343
Length=103200
Score = 109 bits (120), Expect = 8e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 96824 TGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGG 96883
|||||| || |||||| | ||| | |||||| | |||| || ||| || || ||
Sbjct 6465 TGGCCTTGTTCCAATGTTAAGAGTATACAATAATACCGCACGTTATGTTGACCAAGGTGG 6406
Query 96884 CAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGA 96943
|||||||| |||||||| | || | || |||||||||||||| | || |||||||
Sbjct 6405 AAATAAACGTCCAGGCGCGTTTGCAATATATTTGGAACCTTGGCATGGTGATATTTTTGA 6346
Query 96944 CTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTA 97003
||| | || | ||||| |||| ||||| | |||| || ||| |||||||
Sbjct 6345 ATTTCTGGATTTAAAGAAAAATACTGGAAAAGAAGAAGTCAGAGCTAGAGACATGTTTTA 6286
Query 97004 TGCACTCTGGGTGCCAGATTTGTTCATG 97031
|||| | ||| | |||||||||||||||
Sbjct 6285 TGCATTGTGGATTCCAGATTTGTTCATG 6258
>seq119
Length=197918
Score = 109 bits (120), Expect = 8e-19
Identities = 535/828 (65%), Gaps = 40/828 (5%)
Strand=Plus/Minus
Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097
||||| | ||| ||| ||||| ||||| || |||||| | || || || || | || |
Sbjct 167983 AGGCTGAAGCCAGCTTCTGGACAGTCGAGGAAGTCGATTTATCAAAAGATATGGAAGACT 167924
Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTG 125157
|| | | || | | || | ||||| | ||||| ||||| | || || |||||||
Sbjct 167923 GGAACAATC---TCAAGGATTCAGAGCGTCATTTTATCTCGCATGTATTAGCTTTCTTTG 167867
Query 125158 CCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGA-GTTGAC 125215
| | || ||||| ||||| || || ||| | |||| || ||| ||| || ||| |
Sbjct 167866 CTGCATCTGATGGCATCGTAAATGAGAATTTAATTGAG-CGTTTCAGTCAGGAAGTTCAA 167808
Query 125216 CATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGG 125274
||||||| | ||| | ||| || ||||||||||| || || || || |||||||
Sbjct 167807 G-TTCCAGAAGC-TCGATTCTTCTATGGATTCCAAATTGCTATGGAAAATGTACACTCGG 167750
Query 125275 AAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAACGTAAACACATGC 125331
| |||||||| | | | ||||| | || ||| | ||| | ||| ||| || |
Sbjct 167749 AGATGTACTCAATATTAATTGAAACTTATATTAGAGATGCAAAGCAGCGT---GACTTCT 167693
Query 125332 TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGT 125391
| || || ||||| || || | || | | | || |||||| | |||| | |
Sbjct 167692 TATTCAATGCAATTGAGACACTTCCATGTGTTAAGAAGAAGGCTGACTGGGCTTTAAATT 167633
Query 125392 GGATCGATGACGACAAGTCTTCGTAC---GCCGACAGACTGGTGGCATTCGCCGCCGTAG 125448
|||| || | |||| | | || | || || | | || || || || || |
Sbjct 167632 GGAT--AT-CCAGCAAGAATGCAAACTTTGGTGAACGAGTTATTGCTTTTGCAGCTGTCG 167576
Query 125449 AGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCA 125508
| || || |||||| ||||| ||||| || || |||||| | |||||| | ||| | |
Sbjct 167575 AAGGGATTTTCTTTAGTGGTAGCTTTGCAGCTATATTTTGGATTAAGAAGAGAGGATTAA 167516
Query 125509 TGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACT 125568
|||| || |||| || || |||| || ||||||| || || || ||||||
Sbjct 167515 TGCCAGGGTTGACATTTTCAAATGAACTTATTTCGAGAGACGAAGGACTTCATCGTGACT 167456
Query 125569 TTGCCATTC-TACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAG 125627
||| ||| | || ||| ||| |||| | | || | ||| | | | ||||
Sbjct 167455 TTG-CATGCTTAATGT---ACAAACATCT-TGAACAGA------AGCCACCAAAGGAAAG 167407
Query 125628 -GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCT 125686
|| | | ||| | || || || || | || || | || ||| |||| || | ||
Sbjct 167406 AGTAGTTGAAATTATCACAGAGGCTGTAAAAATTGAGAAGGAATTTTTAACTGACGCACT 167347
Query 125687 ACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGC 125746
|| || | ||| | |||||||| || | ||||| |||||||||| ||||| ||
Sbjct 167346 TCCAGTTAAGATGTTGGGCATGAATTGTGATTTAATGACTCAGTACATAGAATTTGTTGC 167287
Query 125747 AGATCGTCTACTGTACGAGTT--GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTT- 125803
|||| | || || || || || | | || | || || |||| ||||| ||
Sbjct 167286 TGATCATTTATTGGGTGAATTGGGACTTG--ATAAAGTCTATAATACCAAAAATCCATTC 167229
Query 125804 TGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGA 125851
| |||| ||| || ||||| ||||| ||||| ||||| |||||
Sbjct 167228 TCATTT-ATGGAATTTATTTCACTTGAGGGCAAGACAAACTTCTTCGA 167182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740818124179000
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