Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq767 167 3e-36 seq6386 163 4e-35 seq343 109 8e-19 seq119 109 8e-19 >seq767 Length=55330 Score = 167 bits (184), Expect = 3e-36 Identities = 383/570 (67%), Gaps = 14/570 (2%) Strand=Plus/Plus Query 70061 CAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTAT 70120 |||| || ||| |||| ||||| || ||||| |||||| | || | || |||| ||| Sbjct 37569 CAAGTTGGTGATTTGGGTCCAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATAT 37628 Query 70121 GTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGAC 70180 | ||||| || ||| || || || |||| ||||| || ||||||| Sbjct 37629 AAAACATGCGATGATGAATATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGA- 37687 Query 70181 ACTC-TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGA 70239 || | |||| ||||||||| ||| | | || || || || |||||||||| | || Sbjct 37688 ACGCATCAAAGCCAATCCAAATGATCGTCGTATTATATTGAGCGCATGGAATCCAGTGGA 37747 Query 70240 TTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTA-CTCG-TACGAT 70297 | | ||||||||||| ||||| ||||||||| | | ||| ||||| ||| || || Sbjct 37748 CATTCCACAAATGGCACTTCCACCATGTCACTGTCTCGTTCAATTTTATGTCGCTA--AT 37805 Query 70298 GGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTT 70357 || ||||| ||| | | || || || || || ||||| || || || || || Sbjct 37806 GGTGAATTGAGCTGCCAATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTC 37865 Query 70358 AACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCG 70417 || |||||| ||| | | |||||| ||||||||||||| |||| |||| | Sbjct 37866 AATATTGCATCGTATGCCTTATTGACGTACATGATTGCTCATGTTACAAATTTGAAGCCT 37925 Query 70418 CACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTA----AATCACATCGAGCC 70473 || || || || || ||||||| ||||| |||||| ||||||| ||||| Sbjct 37926 GGTGATTTTGTTCATACTTTTGGCGATGCTCA----TATTTACACGAATCACACTGAGCC 37981 Query 70474 ATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAA 70533 ||| || | |||||||||||| |||| | || || || || || | | ||| | Sbjct 37982 ATTGAAAGAGCAACTCGAACGTAAGCCACGTCCATTCCCACAGTTGAAAATCAAGCGTCA 38041 Query 70534 AGTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATA 70593 |||| ||||| || |||||||| ||||||||| | | | || || ||||| || Sbjct 38042 AGTTTCTAATATCGATGATTTTAAGTTTGAAGATTTTGAAGTCATTGGATATGATCCGTA 38101 Query 70594 CCCTAAGATTCCCATGGTTCTGGCTGTTTA 70623 || ||| |||| |||||||||| Sbjct 38102 TCCACCTATTAAAATGGAAATGGCTGTTTA 38131 >seq6386 Length=10331 Score = 163 bits (180), Expect = 4e-35 Identities = 383/572 (67%), Gaps = 16/572 (3%) Strand=Plus/Minus Query 127101 TTTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGT 127160 ||| | ||| || ||||| ||||||| |||||||| | ||||| || || || |||| Sbjct 9001 TTTTCTGTAGAAAATGACACCGGCTCTTGGACCTCTTAATGTCTTATGAGTAGTTGTGGA 8942 Query 127161 CACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAG-CCCGCAA 127219 |||| ||| |||| ||||| || ||||||||||| | |||| |||| || | || Sbjct 8941 TACAACATCAGAATATTCAAAAGGTGATGGAATGACTTTAGCAGCAA-CAAGACCAGAAA 8883 Query 127220 TGTGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTC 127279 ||||||| ||||| | | || | | | ||| ||||| || |||||||| Sbjct 8882 TGTGTGCCATATCAGAAAATAGATATGCATTATTTTGATCTGCAATTTCACGGAATCGCT 8823 Query 127280 TATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATA 127339 |||| ||||||| ||| || ||| | || || || || | | || ||||||| Sbjct 8822 TATAATCCAAGCATCGACTGTAACAAGACATTCCAGCGATAATAATTTTTGGCTTGAATA 8763 Query 127340 GATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGT 127399 || ||| ||| | | |||| |||| |||| ||| |||||| || ||| || || | Sbjct 8762 ATTTTGCAGACTCTTCTAATTTGCCATAATCGATGAGACCAGTCGCAGCATCAACTTTAT 8703 Query 127400 ACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGA----CACGT-TGCGG-------AATC 127447 | ||||| ||| || || | |||||||| || | | | | || |||| Sbjct 8702 AAGGCATAGATTCAAAGAAAATGGATGTAGCTGAAATTCTCTTATTTGGAGTCATAAATC 8643 Query 127448 CGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAA 127507 |||| || | || || || ||||| ||||| |||||||| |||||| | || || | || Sbjct 8642 CGTGAGTTAAATGACCACCATCGGGAAGATCAAGTCCCATAATTCTATCATGTGGCTGAA 8583 Query 127508 CGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTC 127567 | | | || || || || || || || ||| || || || || || ||| |||| Sbjct 8582 TCAGTGCTGTATAGACAGCGAAATTTGCAGGCGATCCAGAATAAGGCTGAACATTTACTC 8523 Query 127568 CCCATTCGGACTCGTTCAAATTGA-ACGCTCTGAGACATCGCTGCTGTGCTAGCAGTTCG 127626 ||||||| || | | ||| | | ||| | ||| || ||||| || | ||| Sbjct 8522 CCCATTC-TTCTGGATTTAATCCATAAGCTTCCAATGATCTCTTTTGTGCGAGAATTTCA 8464 Query 127627 ATGCGATCGATAAACTCGTTACCACCATAGTA 127658 || |||||| |||| |||||||||||||| Sbjct 8463 ATTTCATCGATGAACTGATTACCACCATAGTA 8432 >seq343 Length=103200 Score = 109 bits (120), Expect = 8e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 96824 TGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGG 96883 |||||| || |||||| | ||| | |||||| | |||| || ||| || || || Sbjct 6465 TGGCCTTGTTCCAATGTTAAGAGTATACAATAATACCGCACGTTATGTTGACCAAGGTGG 6406 Query 96884 CAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGA 96943 |||||||| |||||||| | || | || |||||||||||||| | || ||||||| Sbjct 6405 AAATAAACGTCCAGGCGCGTTTGCAATATATTTGGAACCTTGGCATGGTGATATTTTTGA 6346 Query 96944 CTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTA 97003 ||| | || | ||||| |||| ||||| | |||| || ||| ||||||| Sbjct 6345 ATTTCTGGATTTAAAGAAAAATACTGGAAAAGAAGAAGTCAGAGCTAGAGACATGTTTTA 6286 Query 97004 TGCACTCTGGGTGCCAGATTTGTTCATG 97031 |||| | ||| | ||||||||||||||| Sbjct 6285 TGCATTGTGGATTCCAGATTTGTTCATG 6258 >seq119 Length=197918 Score = 109 bits (120), Expect = 8e-19 Identities = 535/828 (65%), Gaps = 40/828 (5%) Strand=Plus/Minus Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097 ||||| | ||| ||| ||||| ||||| || |||||| | || || || || | || | Sbjct 167983 AGGCTGAAGCCAGCTTCTGGACAGTCGAGGAAGTCGATTTATCAAAAGATATGGAAGACT 167924 Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTG 125157 || | | || | | || | ||||| | ||||| ||||| | || || ||||||| Sbjct 167923 GGAACAATC---TCAAGGATTCAGAGCGTCATTTTATCTCGCATGTATTAGCTTTCTTTG 167867 Query 125158 CCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGA-GTTGAC 125215 | | || ||||| ||||| || || ||| | |||| || ||| ||| || ||| | Sbjct 167866 CTGCATCTGATGGCATCGTAAATGAGAATTTAATTGAG-CGTTTCAGTCAGGAAGTTCAA 167808 Query 125216 CATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGG 125274 ||||||| | ||| | ||| || ||||||||||| || || || || ||||||| Sbjct 167807 G-TTCCAGAAGC-TCGATTCTTCTATGGATTCCAAATTGCTATGGAAAATGTACACTCGG 167750 Query 125275 AAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAACGTAAACACATGC 125331 | |||||||| | | | ||||| | || ||| | ||| | ||| ||| || | Sbjct 167749 AGATGTACTCAATATTAATTGAAACTTATATTAGAGATGCAAAGCAGCGT---GACTTCT 167693 Query 125332 TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGT 125391 | || || ||||| || || | || | | | || |||||| | |||| | | Sbjct 167692 TATTCAATGCAATTGAGACACTTCCATGTGTTAAGAAGAAGGCTGACTGGGCTTTAAATT 167633 Query 125392 GGATCGATGACGACAAGTCTTCGTAC---GCCGACAGACTGGTGGCATTCGCCGCCGTAG 125448 |||| || | |||| | | || | || || | | || || || || || | Sbjct 167632 GGAT--AT-CCAGCAAGAATGCAAACTTTGGTGAACGAGTTATTGCTTTTGCAGCTGTCG 167576 Query 125449 AGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCA 125508 | || || |||||| ||||| ||||| || || |||||| | |||||| | ||| | | Sbjct 167575 AAGGGATTTTCTTTAGTGGTAGCTTTGCAGCTATATTTTGGATTAAGAAGAGAGGATTAA 167516 Query 125509 TGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACT 125568 |||| || |||| || || |||| || ||||||| || || || |||||| Sbjct 167515 TGCCAGGGTTGACATTTTCAAATGAACTTATTTCGAGAGACGAAGGACTTCATCGTGACT 167456 Query 125569 TTGCCATTC-TACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAG 125627 ||| ||| | || ||| ||| |||| | | || | ||| | | | |||| Sbjct 167455 TTG-CATGCTTAATGT---ACAAACATCT-TGAACAGA------AGCCACCAAAGGAAAG 167407 Query 125628 -GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCT 125686 || | | ||| | || || || || | || || | || ||| |||| || | || Sbjct 167406 AGTAGTTGAAATTATCACAGAGGCTGTAAAAATTGAGAAGGAATTTTTAACTGACGCACT 167347 Query 125687 ACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGC 125746 || || | ||| | |||||||| || | ||||| |||||||||| ||||| || Sbjct 167346 TCCAGTTAAGATGTTGGGCATGAATTGTGATTTAATGACTCAGTACATAGAATTTGTTGC 167287 Query 125747 AGATCGTCTACTGTACGAGTT--GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTT- 125803 |||| | || || || || || | | || | || || |||| ||||| || Sbjct 167286 TGATCATTTATTGGGTGAATTGGGACTTG--ATAAAGTCTATAATACCAAAAATCCATTC 167229 Query 125804 TGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGA 125851 | |||| ||| || ||||| ||||| ||||| ||||| ||||| Sbjct 167228 TCATTT-ATGGAATTTATTTCACTTGAGGGCAAGACAAACTTCTTCGA 167182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740818124179000