Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq296 96.9 2e-15
seq442 84.2 1e-11
>seq296
Length=113092
Score = 96.9 bits (106), Expect = 2e-15
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
|||||||||||||| || ||||| || |||||||| || ||| | | || |||
Sbjct 112875 ACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTCAATGTACGACCATCTTCC 112934
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280
||||| ||||| || || ||||| || ||||| | || || |||||||| ||
Sbjct 112935 AATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTGTCTTGG 112994
Query 33281 ATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337
||| |||| |||| ||| ||| ||||| || | ||| || | || || |||
Sbjct 112995 ATCTTTGCCT---TTACATTTTCAATTGTGTCTGATGGCTCAACTTCTAATGTGATGGTT 113051
Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
||||| || | ||| || |||||||||||||||
Sbjct 113052 TTTCCTGTCAAAGTCTTGACGAAAATTTGCATG 113084
>seq442
Length=86436
Score = 84.2 bits (92), Expect = 1e-11
Identities = 153/220 (70%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
|||||||| || || | ||| ||||||||||| || ||||| || ||| | |
Sbjct 25002 CGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGACCA 25061
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| || ||||| |||||| ||| || ||||| || || || | || || ||||| ||
Sbjct 25062 TCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTA 25121
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTC-GTTGGGTTGAACGTCCAGAGT 33330
|| |||| ||| || || ||| ||||||||| | ||| | | || || || ||
Sbjct 25122 TCTTGAATCTTAGCC---TTGACATTTTCAATCGTGTCAGATGGCTCG-ACTTCGAGGGT 25177
Query 33331 TATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| || || ||||| | ||||| ||||| || ||||||
Sbjct 25178 AATTGTCTTACCCGTCAAGGTTTTGACGAAGATCTGCATG 25217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318676490220450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |