Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq296 109 4e-19
seq442 105 5e-18
>seq296
Length=113092
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972
|||||||| | || ||||| || ||||| || ||| | ||| ||| |||| |||
Sbjct 112875 ACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTCAATGTACGACCATCTTCC 112934
Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032
|||||||||||||| || ||||| || || ||||| | || | |||||||| |||
Sbjct 112935 AATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTGTCTTGG 112994
Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092
|| ||| || || | ||| || |||| ||||| || || | || || |||||
Sbjct 112995 ATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTCAACTTCTAATGTGATGGTTTTT 113054
Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCATG 44122
|| || |||||||| || || |||||||||
Sbjct 113055 CCTGTCAAAGTCTTGACGAAAATTTGCATG 113084
>seq442
Length=86436
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
||||| || || || || ||||||||| || || || ||| | ||| ||| ||||
Sbjct 25005 AACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGACCATCT 25064
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|| ||||||||||| ||||| ||||| || || || || | || | ||||| ||||||
Sbjct 25065 TCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTATCT 25124
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
||| || ||||| | ||| || || | ||||| || |||| ||||||||
Sbjct 25125 TGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTAATTGTC 25184
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
||||| || || || || || || || ||||||
Sbjct 25185 TTACCCGTCAAGGTTTTGACGAAGATCTGCATG 25217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354665071751700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |