Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq767 185 1e-41
seq10553 127 2e-24
>seq767
Length=55330
Score = 185 bits (204), Expect = 1e-41
Identities = 398/583 (68%), Gaps = 38/583 (7%)
Strand=Plus/Minus
Query 6841 TAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAGCTTGA 6900
|||||||||||||| || | ||||||| ||| ||||| || |||| || | | |||
Sbjct 37963 TAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTTGTAACATGA 37904
Query 6901 GCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATA 6960
||||| | || || ||||| ||||| || || | ||| ||||| || || | ||||||
Sbjct 37903 GCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCCAAGACCCATA 37844
Query 6961 TCTGCTGATCTTTGATAACATTGACAAGATAAAAT----ATTGTCTATAGCATAAAATTG 7016
|| ||||||||||| || |||| | || | || | ||| | | ||||||||||
Sbjct 37843 TCAGCTGATCTTTGGTATAATTGGC-AGCTCAATTCACCATTAGCGA---CATAAAATTG 37788
Query 7017 ACACAATACA-TGACATGGAGGTAAAACAGCC---TGATCTATATCAGATGGATTCCAAG 7072
| || | ||| |||||||| || || ||| || || || ||||||||| |
Sbjct 37787 A-ACGAGACAGTGACATGGTGG---AAGTGCCATTTGTGGAATGTCCACTGGATTCCATG 37732
Query 7073 CAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTT--ATAATTATTTG 7130
| ||| || |||||| | |||||||||||| | ||| | | ||| || | |
Sbjct 37731 CGCTCAATATAATACGACGATCATTTGGATTGGCTTTGA--TGCGTTCAATGACATCCTT 37674
Query 7131 TAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAA 7190
|||||| || || || || |||||||| | | || || || |||| || || |||||
Sbjct 37673 TAATTGGTCAATTCCTTGGCCTTCATATTCATCATCGCATGTTTTATATTTGGCACCAAA 37614
Query 7191 ATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCC 7250
||||| ||| ||||| ||||||| ||||| |||||||| ||| ||||| || ||| ||
Sbjct 37613 ATGTCGCCACTGAAATCCATAAACTGGACCCAAATCACCAACTTGACGATCATGAAAACC 37554
Query 7251 TAATCGATTTA--AATT---AGATTTTGATCCATAAGCATCCCAAATATGTACAGAtttt 7305
|| || | |||| | || | | | |||||||| | | | ||| |
Sbjct 37553 GGATGCATCAAGGAATTCACGCGTACTGTTTC-----CGTCCCAAATTTTT--ATATTCT 37501
Query 7306 t----ttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTAC 7361
| | | ||||| || || ||| |||||||| | |||||||| ||| ||||| |
Sbjct 37500 TCGCCTGTAGCAATTT--AGCATCTGTGGATCCTTTTACGAACCATAGAAGCTCTTCAGC 37443
Query 7362 TATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAAT 7404
| ||| |||||||| | || ||| || || | || || |||
Sbjct 37442 AACTCCTCGCCAAAATACTCGTTTGGTTGTAAGCAATGGAAAT 37400
>seq10553
Length=1873
Score = 127 bits (140), Expect = 2e-24
Identities = 294/441 (67%), Gaps = 18/441 (4%)
Strand=Plus/Minus
Query 164551 GGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAA 164607
|||||||| || ||||| ||| |||| | | | | || ||| | || ||| |||
Sbjct 1473 GGTAAAACGTTGATGGCACGACAGATTGGT-ACGATGTTGAATGCAAGAGAACCG--AAA 1417
Query 164608 ATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGA 164667
||||| || ||||| || | ||| |||| ||||| |||||| ||||| ||| | |
Sbjct 1416 ATTGTAAACGGTCCACAAATTTTGGACAAGTATGTTGGTGAGAGTGAAGCAAATATCCGT 1357
Query 164668 AAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTAGCTAGTAAATTACAT 164727
| | ||| ||| || ||||||||| |||||| | |||| | ||| | ||
Sbjct 1356 AGACTTTTTGCGGATGCAGAAGAAGAAGAAAAGAGATTAGGTCCAAATAGCGGTCTCCAC 1297
Query 164728 GTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGTGATA-------ATAT 164780
|||| | || ||||| || |||||| |||| ||| || ||| | | ||
Sbjct 1296 ATTATCATATTCGATGAAATCGATGCTATTTGTAAATCTCGAGGTTCTGTGGCTGGAAAT 1237
Query 164781 TATT-----CATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCC 164835
| | |||||| | || || ||||| || | |||| || || ||||| |||
Sbjct 1236 TCTGGCGTCCATGATACGGTTGTGAATCAATTATTGGCTAAGATCGACGGTGTTGAACAA 1177
Query 164836 TTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTA 164895
|||||||| ||||| | | |||||||| || |||| ||| | ||||| || |||||
Sbjct 1176 TTAAATAACATTTTGGTCATCGGTATGACAAATCGACGTGACATGATTGACGAAGCTTTG 1117
Query 164896 TTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGC 164955
| ||||||||| |||| ||| | | || ||||| || || || | || ||| |
Sbjct 1116 ATGCGACCTGGTAGATTGGAAGTTCAGATGGAAATTGGCTTGCCTAATGAACCTGGAAGA 1057
Query 164956 CTTCAAATTTTAAAAGTTCAT 164976
| ||||||||||| |||||
Sbjct 1056 GTACAAATTTTAAATATTCAT 1036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595678155390000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |