Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq780 98.7 5e-16
seq6208 89.7 3e-13
seq2226 89.7 3e-13
>seq780
Length=55915
Score = 98.7 bits (108), Expect = 5e-16
Identities = 79/95 (83%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 11429 AAATATAGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487
|||||| | || ||||||| ||| ||||| | || |||||||||| ||||||||
Sbjct 36277 AAATATTAATTTTGTAAAAAAAGAAAGTTGGCTCCAGAGAGGATCGAACTCACGACCTTC 36218
Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522
||||||||||||||||||||| |||||||||||||
Sbjct 36217 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 36183
Score = 91.5 bits (100), Expect = 8e-14
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 11445 AAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||| |||| |||| | || |||||||||| ||||||||||||||||||||||||
Sbjct 18296 AAAAAAGAAATCTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGAC 18237
Query 11504 GCTCTRACCAACTGAGCTA 11522
||||| |||||||||||||
Sbjct 18236 GCTCTAACCAACTGAGCTA 18218
>seq6208
Length=7563
Score = 89.7 bits (98), Expect = 3e-13
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||| | || |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 81 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 22
Query 11515 CTGAGCTA 11522
||||||||
Sbjct 21 CTGAGCTA 14
>seq2226
Length=17968
Score = 89.7 bits (98), Expect = 3e-13
Identities = 68/80 (85%), Gaps = 2/80 (3%)
Strand=Plus/Minus
Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
||||||| || |||| | || |||||||||| |||||||||||||||||||||||
Sbjct 1802 TAAAAAA--AATATGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGA 1745
Query 11503 CGCTCTRACCAACTGAGCTA 11522
|||||| |||||||||||||
Sbjct 1744 CGCTCTAACCAACTGAGCTA 1725
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261408260302900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |