Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq10 219 7e-52
>seq10
Length=552578
Score = 219 bits (242), Expect = 7e-52
Identities = 498/745 (67%), Gaps = 47/745 (6%)
Strand=Plus/Plus
Query 193461 CAGGATGGATCTTATCTTGCCGAGTTTCTTTTGTCT-AAGGGATATGAAGTTCATGGTAT 193519
||||||||||| |||||||| || || ||| || || || |||||||||||||| ||
Sbjct 299976 CAGGATGGATCATATCTTGCAGAATT-CTTACTTCAGAAAGGCTATGAAGTTCATGGAAT 300034
Query 193520 TGTAAGGAGAAGTTCCCTAATCAATACTCATAGAATTGATCATATCTATGAGAAG----- 193574
| || ||||||||| ||||||| || ||||| || ||| | ||| | ||
Sbjct 300035 AATTAGAAGAAGTTCCAGTTTCAATACACACAGAATAGAGCATTTATATCAAAATCCAGT 300094
Query 193575 -----ATCA------------CT-----CTTCATTATGGAGATCTAACTGATCCTGTAAA 193612
|||| || ||||||||||| ||| | || ||| || |
Sbjct 300095 TTCACATCAAGAGGGTGCATCCTTTAAACTTCATTATGGTGATATGACGGATA--GTTCA 300152
Query 193613 TGTTATGGGTGTCATTAGGGC---AGTTGAACCTGCTGAGATCTATAATCTTGGTGCTCA 193669
|||| | | | |||| | ||| |||| | || || |||||||||| ||| ||
Sbjct 300153 TGTT-TAGTTAAGATTATTGTTCAAGTGAAACCAACGGAAATTTATAATCTTGCTGCACA 300211
Query 193670 AAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACTTCTAATGTTGATGCTTTAGG 193729
| |||||| ||| | || ||||| | || ||||| || | || || | ||||
Sbjct 300212 ATCTCATGTCAAAATCTCATTTGACTTAAGTGAATATACAGCTGAAGTGGACGGCGTAGG 300271
Query 193730 AACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCTA 193789
||| | | ||||||| || || | | | ||| |||| || | ||| | | ||
Sbjct 300272 AACATTGCGTCTACTTGATGCTATTAGAACTTGTGGATTGGATCAACAAGTTAGATTTTA 300331
Query 193790 TCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCAC 193849
|||||||||||| ||| ||||||| || | | ||||||| | | || | ||
Sbjct 300332 TCAGGCATCTACATCAGAATTGTATGGAAAAGTAGTGGAAACTCCACAAACTGAGAAGAC 300391
Query 193850 ACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAA 193909
|||||| ||||| | ||| |||| ||||| || | ||||| || |||||||| |
Sbjct 300392 ACCATTCTATCCAAGAAGTCCATATGCAGTAGCTAAACTTTATGGATACTGGATCATTAT 300451
Query 193910 GAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATC 193969
||||| ||||| | || || | | || || ||||||| | || ||||| |||||
Sbjct 300452 AAATTACCGTGAAGCTTACGGTATGTATGCATGTAATGGTATTTTATTTAATCATGAATC 300511
Query 193970 TCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTC 194029
||||| ||||| || | || || || | || ||||| | | | |||| || ||
Sbjct 300512 GCCAAGGAGAGGAGAAAATTTCGTTACAAGGAAAATTACCCGATCAGTCGCTAAAATTTC 300571
Query 194030 TGTTGGATTACAG----AAG-ATTCTT-TATCTTGGTAATCTTAATGCTAAGAGGGATTG 194083
|||| || ||| |||||| | |||||||||||| | | || | |||||
Sbjct 300572 ------ATTAAAGCAACAAGAATTCTTGGAACTTGGTAATCTTGACTCAAAACGTGATTG 300625
Query 194084 GGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGA 194143
||| || |||||||| || || ||||| |||||| | ||||||||||||||| | || ||
Sbjct 300626 GGGTCATGCAAAGGACTACGTGGAAGCTATGTGGATGATGTTGCAACAGGATCAGCCAGA 300685
Query 194144 TGATTATGTGATTGCTACAGGTGAA 194168
|||| ||| ||||||||||| |||
Sbjct 300686 AGATTTTGTAATTGCTACAGGCGAA 300710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807292492199000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |