Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq343 497 1e-135
seq119 269 3e-67
>seq343
Length=103200
Score = 497 bits (550), Expect = 1e-135
Identities = 1060/1575 (67%), Gaps = 35/1575 (2%)
Strand=Plus/Plus
Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075
|||||||| || |||| || |||||||| ||||| || || | ||||||||||||||
Sbjct 5041 GCGGGTTTTGTTCGTAAGTAATACATTCCAGTTTTCAGTCCCATTTTCCATCCGTAAAAA 5100
Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135
|| || ||||| ||| |||| | || || |||| ||| ||||| | || ||||||
Sbjct 5101 TGAATGGACGTTAATTTCCCATAATTGGGTTCAGCTACATGAATATTAAACGACTGACTT 5160
Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195
|| || || || ||||| | || |||| ||||| || ||||| | |||||||
Sbjct 5161 TGGTCTATAAAAGCTCCACGATCGGCAGACATTTGAATTTGTGTCTTGACGGAAATTTCC 5220
Query 62196 CAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-----TATTCTGAATGG 62250
|||| |||||||| | || ||||| ||||||| |||| || |||| || |
Sbjct 5221 CAAACCGTTTTATATATATTTTTTATATCATCTGGAA--TTTGCTCAATAGTCTGTATTG 5278
Query 62251 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 62310
| ||| || ||| ||||| | ||||| || || |||| |||||| | || || |
Sbjct 5279 AACCATTATTTGCAATAATTTTGTTCTTCATATCGTCATCCCATAAACCACGTTCAGTCA 5338
Query 62311 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 62370
|| | | | ||||| ||||||| ||||||||||| ||| | || | ||| | |
Sbjct 5339 AATCCTTGATAAGATGGTGATTAACAACTTGAAATTCACCACTGAGAACACGACGATTAT 5398
Query 62371 AAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 62430
||| |||||| || || ||||| | ||||||||| |||||||| |||||||||||||
Sbjct 5399 AAACATTACTTGTGTAAGGTTCAAAGCTCTCATTATTACCCAAAATCTGAGCAGTTGATG 5458
Query 62431 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTT 62490
| |||||||| ||||| | || | ||||| ||||| | || | ||||| ||||
Sbjct 5459 CTGTCGGCATTGGTGCAATTAAGAGTGAATTTCGGAGACCAAACTTTTTAATTTTTTCTT 5518
Query 62491 TTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAA 62550
|||||| |||||||| ||| | ||| | || ||||| |
Sbjct 5519 TTAGAGCTTCCCAATCCCACAAATCGGTGGGAGTCTTATCCCACATATCATATTGTAATA 5578
Query 62551 TACCGTT--ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAG 62608
||| || || || || |||| | || || || |||||||| | || ||||
Sbjct 5579 CACCTTTTGAC-ACCGGAC-ATCCATCGTAAGTCTCATATGGTCCCAATTGTTCTGCTAA 5636
Query 62609 TTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATC 62668
|||||| || | ||| |||||||| |||||||| ||||| || || | | ||||| ||
Sbjct 5637 TTCACAGCTGGACTCCAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTTAAATT 5696
Query 62669 TTGTGCTTCCAGGCTA---TCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCC 62725
|| ||||| | || ||| |||| | | | |||||| || || || |||||
Sbjct 5697 TTTCGCTTC---GTTAGATTCATATGGCATTCTCATCAAAATAAAAGCATCTGCCAATCC 5753
Query 62726 TTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGG 62785
|||||| ||||| || ||||| | |||||| || || || ||||||| || ||
Sbjct 5754 TTGAACTCCAATTCCAATAGGACGATGTCTAAAGTTTGACCGTTTAGCTTCTTCAACGGG 5813
Query 62786 ATAATAATTAATATCTATAATTTTATTGAGAT---TTCTGACAATTACTTTGACCACATC 62842
||| ||||| | | ||||||||||| | || || |||| ||| |||| || ||
Sbjct 5814 ATAGTAATTTACGTTAATAATTTTATTCAAATTCCTTGTGACTATT--TTTG-TAACTTC 5870
Query 62843 CTTCAGTTTGAGAAAATCAAATCGCCCATCTATT-------ACAAACATGTTCAAGGCAA 62895
||||| |||| |||| ||| || | | || ||| |||||||| || || ||||
Sbjct 5871 CTTCAATTTGTGAAAGTCATAT-TCTCTTCGATTTTGTTTGACAAACATATTTAAAGCAA 5929
Query 62896 CAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGC 62955
||||| | ||||||||| || || |||| | | |||||||| ||| || || |
Sbjct 5930 TTGATGCTAAATTACAAACTGCAACTTCATCCTTACTTGAATATTGTACTATTTCCGTAC 5989
Query 62956 AAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 63015
| | ||| ||| || || || | ||| |||||||| || ||| || | ||
Sbjct 5990 ATAAATTCGAACAACGTATTGTCCCAAGATTCTGTTGATTTGATTTCCGGTTGCATGAAT 6049
Query 63016 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 63075
||||||| || || | || ||||||||||| | |||| || || || || ||| |
Sbjct 6050 CCTTATACAGCATATAAGGTGTACCAGTTTCTACTTGAGCCTCAATGATTGCGAACCACA 6109
Query 63076 CGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATC 63135
|| | ||||||| | | | || || | |||| ||| || | ||| | |
Sbjct 6110 AATCTTGTGCCTTTACTTGACGAATATACCTTCCTTCTGCTTCATAGCCTTCATAAAGTT 6169
Query 63136 GTTCGAACTCGTCTCCCCAAAC-ATTGTCCAA-TCCAGGACATTCATCCGGACACATCAA 63193
| || || ||| || || ||| || || |||| || |||||||| ||
Sbjct 6170 TCACAAATTC--CTCACCGTACGATTCAAAAAGACCGGGACTACTATTAGGACACATTAA 6227
Query 63194 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63253
|||||| | | | | | || || ||| || | ||| |||||||| | ||
Sbjct 6228 TGACCACATTTCATTGTTTTCAACCCGACGCATGAACAAATCTGGAATCCACAATGCATA 6287
Query 63254 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 63313
||| | ||||| | ||| ||| || ||||| ||||| || || | ||| || || |
Sbjct 6288 AAACATGTCTCTAGCTCTGACTTCTTCTTTTCCAGTATTTTTCTTTAAATCCAGAAATTC 6347
Query 63314 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63373
| ||||||| |||||| |||||||| ||||| || | | || || ||||| |||||
Sbjct 6348 AAAAATATCACCATGCCAAGGTTCCAAATATATTGCAAACGCGCCTGGACGTTTATTTCC 6407
Query 63374 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 63433
|| || || | || | ||||| ||||| || ||||| |||||||||| || || ||
Sbjct 6408 ACCTTGGTCAACATAACGTGCGGTATTATTGTATACTCTTAACATTGGAACAAGGCCATT 6467
Query 63434 TGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAG 63493
||| || ||||| ||||| | ||||| |||| | || ||||| | || |
Sbjct 6468 TGAAATCCCATTTGTACCAGCTATATATGTTCCTTTTGCTCGAATGCAATGAACATTAAC 6527
Query 63494 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACC 63553
||| ||||| ||||| ||| |||||||||||| ||||||| || ||||| |||||
Sbjct 6528 ACCAATTCCACCTGCTGATTTGCTTATTAATGCGCATTGTTTTAATGTATCATAAATACC 6587
Query 63554 CTCTATGCTATCATC 63568
||| || ||||||
Sbjct 6588 CTCAATAGAATCATC 6602
>seq119
Length=197918
Score = 269 bits (298), Expect = 3e-67
Identities = 567/834 (68%), Gaps = 15/834 (2%)
Strand=Plus/Plus
Query 32997 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33056
|||||||||||| | ||||| |||||||| || | |||||| || || || || ||
Sbjct 167142 AGACATAACTCCACTCTTTTGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCC 167201
Query 33057 TTCCAATGATATATTTTCCATGAAATCA-AACGGATTGGTAACATTATAAAtttttttAA 33115
|| | ||| ||| |||||| |||| | || ||||| | |||||| | ||| | ||
Sbjct 167202 CTCAAGTGAAATAAATTCCAT-AAATGAGAATGGATTTTTGGTATTATAGACTTTATCAA 167260
Query 33116 ATCCCAATTCA-GAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCA 33174
|||||||||| ||| ||| ||| || || |||||||| || |||| | |||
Sbjct 167261 GTCCCAATTCACCCAATAAAT-GATCAGCAACAAATTCTATGTACTGAGTCATTAAATCA 167319
Query 33175 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGAT 33234
|||||||| || | | ||||||||||| || |||| | |||||| | ||||| |
Sbjct 167320 CAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTT 167379
Query 33235 ACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGT 33291
|| || ||||| ||||| | ||| | ||| | ||||| | | | | ||||
Sbjct 167380 ACAGCCTCTGTGATAAT---TTCAACTACTCTTTCCTTTGGTGGCTTCTGTTCAAGATGT 167436
Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351
|| |||| || ||||| || || | || || || |||||||| ||| ||||| ||
Sbjct 167437 TTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTT 167496
Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411
||||| || | || ||||||| || | ||| |||| ||||||||| | || ||
Sbjct 167497 GAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTA 167556
Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33471
||| |||||| || ||||| || || ||||| ||||||| || || ||| | ||
Sbjct 167557 CCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCA 167616
Query 33472 CT-GTCATG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33528
| | || |||||| ||| |||||| || |||||||| || ||||| || | ||
Sbjct 167617 TTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTC 167676
Query 33529 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33588
|| || ||||| || | ||| | || |||| ||| |||||| || || ||
Sbjct 167677 TCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCTAATATAAGTTTCAATTAAT 167736
Query 33589 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33648
| ||||| ||||| || | ||||| || || || || ||||| ||||| ||| |
Sbjct 167737 ATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGA 167796
Query 33649 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCG 33708
|| || | || || ||||| || || || || ||||| ||||| || || ||
Sbjct 167797 GCTTCTGGAACTTGAACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCA 167856
Query 33709 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTAG 33767
||| || ||||| || || |||||||| ||||||| | | | | | | ||
Sbjct 167857 TCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTCTGAATCCT-TGAG 167915
Query 33768 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAA 33821
|| ||||| || | |||||||| |||| ||| ||||| || |||||||| ||
Sbjct 167916 ATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAA 167969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622744547489000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |