Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq296 95.1 1e-14 seq726 86.0 6e-12 >seq296 Length=113092 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || || |||||| | ||||| | ||| | || || Sbjct 113083 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAAACCATCACATTAGAAGTTGAGCCATCA 113024 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || |||||| ||||||||||| || || || || ||| Sbjct 113023 GACACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGAATTCCACCAGACCAA 112964 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | || || |||||| | ||||||| | | | | |||||||| || Sbjct 112963 CAGCGTTTGATCTTCGCAGGAAAACAATTGGAAGATGGTCGTACATTGAGCGACTACAAT 112904 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 || || ||||||||||| | ||| |||| || | ||| | |||||||| Sbjct 112903 ATCCAGAAAGAATCTACATTGCATTTGGTTCTTCGTCTTCGTGGAGGAAA 112854 >seq726 Length=60972 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 71714 AATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGG 71773 || || |||||||| || |||| | || ||||| ||||| ||||||||| | || ||| Sbjct 19461 AAAGAAGGTAAAATGCATGGATTTTTGCGAATGTATTGGGCTAAAAAGATTTTAGAATGG 19402 Query 71774 ACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTC 71833 || ||| || || | | || || | | || ||| |||| ||| | | | ||| Sbjct 19401 ACAGCAACGCCAGAAGATGGTCTTGAAACTGCAATCTATTTAAATGATCGCTTTAATCTT 19342 Query 71834 GACGGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATT 71878 || ||| | ||||| ||||| ||||| || ||||||||||| ||| Sbjct 19341 GATGGTAGAGATCCGAACGGCTATGTGGGCTGCATGTGGAGTATT 19297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478506685138000