Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq767 244 3e-59
seq343 181 3e-40
seq933 84.2 6e-11
>seq767
Length=55330
Score = 244 bits (270), Expect = 3e-59
Identities = 411/586 (70%), Gaps = 8/586 (1%)
Strand=Plus/Plus
Query 111311 TCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCT 111370
||| |||||| | || ||||| || ||| || |||| ||| ||| ||||| |||||
Sbjct 37397 TCAATTTCCATTGCTTACAACCAAACGAGTATTTTGGCGAGGAGTTGCTGAAGAGCTTCT 37456
Query 111371 GTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTG 111430
||||| | ||| ||| |||| || || || || ||| ||||||||||
Sbjct 37457 ATGGTTCGTAAAAGGATCCACAGATGCTAAATTGCTACAGGCGAAGAATATAAAAATTTG 37516
Query 111431 GGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGG 111490
||| ||||| | | ||||| || || ||| || ||| || || ||| ||
Sbjct 37517 GGACGGAAACAGTACGCGTGAATTCCTTGATGCATCCGGTTTTCATGATCGTCAAGTTGG 37576
Query 111491 TGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCAT 111550
|||| | || |||||||| |||||||| ||||| || |||||||| | || |||| |||
Sbjct 37577 TGATTTGGGTCCAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATATAAAA-CAT 37635
Query 111551 GC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTA 111609
|| | || |||||| || |||| ||| |||||| || |||||||||| | || |
Sbjct 37636 GCGATGATGAATATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGAACGCATCA 37695
Query 111610 AGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATG-CATTGGAA 111668
| ||| |||| | |||||| ||||| |||| |||||||| ||| | |||| |
Sbjct 37696 AAGCCAATCCAAATGATCGTCGTATTATATTGAGCGCATGGAATCCAGTGGACATT-CCA 37754
Query 111669 AAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTT 111728
|||||||||||||||||||||| | | || |||||||| | | | || || |
Sbjct 37755 CAAATGGCACTTCCACCATGTCACTGTCTCGTTCAATTTTATGT-CGCTAATGG-TGAAT 37812
Query 111729 TCA--TGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTG 111786
| | |||||| | || || |||| |||||||| |||||||| ||||| || |||||||
Sbjct 37813 TGAGCTGCCAATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTCAATATTG 37872
Query 111787 CAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAAT 111846
|| || || || | || | | | || |||||| |||||||| | || || ||||| |
Sbjct 37873 CATCGTATGCCTTATTGACGTACATGATTGCTCATGTTACAAATTTGAAGCCTGGTGATT 37932
Query 111847 TCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGA 111892
| |||| | | || ||||| ||| ||||||| || |||| |||
Sbjct 37933 TTGTTCATACTTTTGGCGATGCTCATATTTACACGAATCACACTGA 37978
>seq343
Length=103200
Score = 181 bits (200), Expect = 3e-40
Identities = 988/1560 (63%), Gaps = 36/1560 (2%)
Strand=Plus/Minus
Query 363601 TCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660
|| || ||||| | ||| |||| || ||||| || |||||||| | ||| ||| |
Sbjct 6629 TCCTCATGCTTCTTACTATCAATGTCAGATGATTCTATTGAGGGTATTTATGATACATTA 6570
Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG-- 363718
|| | || || | || ||| ||||| ||||||||||| || || ||
Sbjct 6569 AAACAATGCGCATTAATAAGCAAATCAGCAGGTGGAATTGGTGTTA--ATGTTCATTGCA 6512
Query 363719 TTCGTGCACA--GAACAGTTACATTCGCGGCACAGG-GGGATACTCGAATGGGCTGGTTC 363775
|||| ||| | ||||| || || || ||| ||||| || ||||| || ||||
Sbjct 6511 TTCGAGCAAAAGGAACA--TATATAGCTGGTACAAATGGGATT-TCAAATGGCCTTGTTC 6455
Query 363776 CCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCA 363835
| ||| | | || | | ||||| || | || || ||||| |||||| || ||
Sbjct 6454 CAATGTTAAGAGTATACAATAATACCGCACGTTATGTTGACCAAGGTGGAAATAAACGTC 6395
Query 363836 AAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGC 363895
||| |||||||| || ||| | || ||| |||| ||||||||||| ||||| ||
Sbjct 6394 CAGGCGCGTTTGCAATATATTTGGAACCTTGGCATGGTGATATTTTTGAATTTCTGGATT 6335
Query 363896 TCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGG 363955
| |||||| || |||||||| ||| | | || | || |||| |||||| | |||
Sbjct 6334 TAAAGAAAAATACTGGAAAAGAAGAAGTCAGAGCTAGAGACATGTTTTATGCATTGTGGA 6275
Query 363956 TTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCAC 364015
|| | || || ||| || || || | | | |||||| | | || ||
Sbjct 6274 TTCCAGATTTGTTCATGCGTCGGGTTGAAAACAATGAAATGTGGTCATTAATGTGTCCTA 6215
Query 364016 ACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075
| |||| ||||||| || | ||||| || | ||| || || ||| |
Sbjct 6214 ATAGTAGTCCCGGTCTTTTTGAATCGTACGGTGAGGAATTTGTGAAACTTTATGAAGGCT 6155
Query 364076 ATGAATCGGAGGGAAAGGCT---CGT-AAGACAATTCCCGCACAGAAGCTATGGTTTGCC 364131
||||| | || |||| | | ||| ||| || ||||| | | ||||| ||
Sbjct 6154 ATGAAGCAGAAGGAAGGTATATTCGTCAAGTAAAG----GCACAAGATTTGTGGTTCGCA 6099
Query 364132 ATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191
||||| || | || | || || || ||||| |||||| |||| || ||||| ||||||
Sbjct 6098 ATCATTGAGGCTCAAGTAGAAACTGGTACACCTTATATGCTGTATAAGGATTCATGCAAC 6039
Query 364192 CGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGAT 364250
|| || || || || ||| | ||||| ||||| | | | | || ||||||| || ||
Sbjct 6038 CGGAAATCAAATCAACAGAATCTTGGGACAATAC-GTTGTTCGAATTTATGTACGGAAAT 5980
Query 364251 TATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCC 364310
| |||| | | || || ||| || ||||| | || || || || |
Sbjct 5979 AGTACAATATTCAAGTAAGGATGAAGTTGCAGTTTGTAATTTAGCATCAATTGCTTTAAA 5920
Query 364311 GGCGTTTGTAAAAGA---TGGTACT---TTTGACCACCAGCATCTTTATGACGTAACCTA 364364
|||||| ||| | | | | | |||| || | | | || || || |
Sbjct 5919 TATGTTTGTCAAACAAAATCGAAGAGAATATGACTTTCACAAATTGAAGGAAGTTACAAA 5860
Query 364365 TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC 364424
| || | ||| | | || |||| || ||||| ||||| || |||||
Sbjct 5859 AATAGTCACAAGGAATTTGAATAAAATTATTAACGTAAATTACTATCCCGTTGAAGAAGC 5800
Query 364425 CGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGT 364484
| || || || | | ||||| || ||||| |||| || || || | || || |
Sbjct 5799 TAAACGGTCAAACTTTAGACATCGTCCTATTGGAATTGGAGTTCAAGGATTGGCAGATGC 5740
Query 364485 TTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGAT 364544
|||||| || | | ||| ||| ||| || || || | ||||| | | ||
Sbjct 5739 TTTTATTTTGATGAGAATGCCATATGAATCTAACGAAGCGAAAAATTTAAATCAACAAAT 5680
Query 364545 CTTTGAAACAATGTATTTTGCCGCAATG-ACTGCTTCGTGTGATTTGGCAAAAACCAA-- 364601
||||||||||| |||| || ||| || | | | | ||||| || ||| || |||
Sbjct 5679 ATTTGAAACAATTTATTATGGTGCATTGGAGTCCAGC-TGTGAATTAGCAGAA--CAATT 5623
Query 364602 GGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCT 364661
|||| || ||||| || || | || | || | || ||| || | |||| |
Sbjct 5622 GGGACCATATGAGACTTACGATGGATGTCCGGTGTCAAAAGGTGTATTACAATATGATAT 5563
Query 364662 ATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAA 364721
||| || || || | | ||| | ||||| | ||| || |||| ||
Sbjct 5562 GTGGGATAAGACTCCCACCGATTTGTGGGATTGGGAAGCTCTAAAAGAAAAAATTAAAAA 5503
Query 364722 GCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGAT 364781
| |||| || || || ||| | | || || ||||| || || || ||||| |||||
Sbjct 5502 GTTTGGTCTCCGAAATTCACTCTTAATTGCACCAATGCCGACAGCATCAACTGCTCAGAT 5443
Query 364782 CCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCT 364841
| || || || ||| |||| ||||| | ||||| ||| ||||| || || |||||
Sbjct 5442 TTTGGGTAATAATGAGAGCTTTGAACCTTACACAAGTAATGTTTATAATCGTCGTGTTCT 5383
Query 364842 TTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCT 364901
|| ||||||| || |||||| | | || |||||||| | | || || || |
Sbjct 5382 CAGTGGTGAATTTCAAGTTGTTAATCACCATCTTATCAAGGATTTGACTGAACGTGGTTT 5323
Query 364902 GTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC 364961
|||| |||| ||||||||| | || || || ||||||||| | |||| |||
Sbjct 5322 ATGGGATGACGATATGAAGAACAAAATTATTGCAAATAATGGTTCAATACAGACTATTGA 5263
Query 364962 AGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAAC 365021
| ||||||| ||| | || ||| || ||||| || |||||||||||| | ||
Sbjct 5262 GCAAATTCCAGATGATATAAAAAATATATATAAAACGGTTTGGGAAATTTCCGTCAAGAC 5203
Query 365022 TCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGT 365081
| ||| | ||| | |||||||| || |||||||| || || ||||||||||| |
Sbjct 5202 ACAAATTCAAATGTCTGCCGATCGTGGAGCTTTTATAGACCAAAGTCAGTCGTTTAA--T 5145
Query 365082 ATTCATG--ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139
||||||| || | || | | | || | || ||||| ||||| ||||| ||||||
Sbjct 5144 ATTCATGTAGCTGAACCCAATTATGGGAAATTAACGTCCATTCATTTTTACGGATGGAAA 5085
>seq933
Length=47053
Score = 84.2 bits (92), Expect = 6e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 13097 TTTTCAAAACAGGTGGCTTTCCGTCAAAAACATAGACGGGTTTAATTCCTGCTTCAATTA 13156
|||||| | | ||||||||||| ||||||||||| || || |||||||| ||| | |
Sbjct 20520 TTTTCATATCTGGTGGCTTTCCATCAAAAACATAAACCGGCTTAATTCCATTTTCCAAAA 20579
Query 13157 ATCGAATGGTTCGGTAAAAAATACCTGTTAAATGTGAAGTCACTTCACC 13205
|||||| || || |||||||| || | |||||||| || ||||||
Sbjct 20580 GTCGAATTGTACGATAAAAAATGCCCATCAAATGTGATGTTGTTTCACC 20628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302919002851550
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