Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq119 437 1e-117
seq611 114 1e-20
seq607 114 1e-20
seq106 114 1e-20
seq205 95.1 1e-14
>seq119
Length=197918
Score = 437 bits (484), Expect = 1e-117
Identities = 627/877 (71%), Gaps = 15/877 (2%)
Strand=Plus/Plus
Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACAT 92802
|||||||| || |||| ||| || || | || | || | | |||||| ||||
Sbjct 167101 TAGAAATCAGCGTCTAATGTGAAAACTTGTTCTTGACGACT---AGACATAACTCCACTC 167157
Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862
||||| ||||| ||||| ||| ||| ||||| |||||||| || || | || || ||
Sbjct 167158 TTTTGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCCCTCAAGTGAAATA-AA 167216
Query 92863 TTCACTA---GTGATTGGATTCTTGGCGTTATAATACTTT-TCACCGATCAACTCGTACA 92918
||| || | || |||||| |||| ||||| ||||| ||| ||| || ||
Sbjct 167217 TTCCATAAATGAGAATGGATTTTTGGTATTATAG-ACTTTATCAAGTCCCAATTCACCCA 167275
Query 92919 ATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAA 92978
|||| |||||| ||||||||||||||||||| ||| |||||||||||||| || | |
Sbjct 167276 ATAAATGATCAGCAACAAATTCTATGTACTGAGTCATTAAATCACAATTCATGCCCAACA 167335
Query 92979 GACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGA 93038
|| || || ||||| || || || || ||||| ||| || || ||| | | |
Sbjct 167336 TCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTTACAGCCTCTGTGATAA 167395
Query 93039 TTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098
|||| | |||||| |||||||| || ||| | | || |||||||||||||| ||||
Sbjct 167396 TTTCAACTACTCTTTCCTTTGGTGGCTTCTGTTCAAGATGTTTGTACATTAAGCATGCAA 167455
Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158
|||| ||| | |||||||||| || || | ||||| ||||| || ||||| |
Sbjct 167456 AGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTTGAAAATGTCAACCCTGGCA 167515
Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTT 93218
| ||||| ||||| | ||||||||| | ||||| |||||| ||| || || ||||
Sbjct 167516 TTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTACCACTAAAGAAAATCCCTT 167575
Query 93219 CCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG---ATCC 93275
| || |||||||| || | || ||||| |||| ||||| ||| ||||| ||||
Sbjct 167576 CGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGC---ATTCTTGCTGGATATCC 167632
Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335
| ||||||||||| || || || ||||||| ||| || ||||| || || || || ||||
Sbjct 167633 AATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTCTCAATTGCATTGAATA 167692
Query 93336 GGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAG 93395
| | || |||| | | ||||| || || || || ||||| | || ||||| || |
Sbjct 167693 AGAAGTCACGCTGCTTTGCATCTCTAATATAAGTTTCAATTAATATTGAGTACATCTCCG 167752
Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455
| || ||||| ||||| |||||||||||||| ||||| ||| |||||| | | || |
Sbjct 167753 AGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGAGCTTCTGGAACTTGAA 167812
Query 93456 CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515
|||| ||| || | ||| | | ||| ||||| || || ||||| ||||| ||||| |
Sbjct 167813 CTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCATCAGATGCAGCAAAGA 167872
Query 93516 aaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATA 93575
|||| |||| |||| |||||||| ||| ||| || || || | ||| || |
Sbjct 167873 AAGCTAATACATGCGAGATAAAATGACGCTCTGAATCCTTGAGATTGTTCCAGTCTTCCA 167932
Query 93576 GATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612
||||||||| | ||||||||| ||||| ||||| ||
Sbjct 167933 TATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAA 167969
>seq611
Length=67363
Score = 114 bits (126), Expect = 1e-20
Identities = 73/77 (95%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct 23657 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGCGTGG 23598
Query 126327 GTTCGAACCCCACACCT 126343
|||||||||||||||||
Sbjct 23597 GTTCGAACCCCACACCT 23581
>seq607
Length=67713
Score = 114 bits (126), Expect = 1e-20
Identities = 73/77 (95%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct 52406 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCATCTGGGAGCGTGG 52347
Query 126327 GTTCGAACCCCACACCT 126343
|||||||||||||||||
Sbjct 52346 GTTCGAACCCCACACCT 52330
>seq106
Length=206979
Score = 114 bits (126), Expect = 1e-20
Identities = 73/77 (95%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct 9791 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCATCTGGGAGCGTGG 9732
Query 126327 GTTCGAACCCCACACCT 126343
|||||||||||||||||
Sbjct 9731 GTTCGAACCCCACACCT 9715
>seq205
Length=143123
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/158 (74%), Gaps = 3/158 (2%)
Strand=Plus/Minus
Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514
||||||||| || | || || ||||||||||| || || ||||| ||||| ||||||
Sbjct 86169 ACTTCTTGACTGAACGT-TCAACAAGATTTTCATTAACGATCCCATCAGATGCAGCAAAA 86111
Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGAT 93574
||||| |||| ||| ||||| ||| |||| |||||||| || ||||| |
Sbjct 86110 AAAGCTAATACATGAGAGATAAATTGTCGCTCA--GTCTTTAAGTCTAATCCAATAAGTC 86053
Query 93575 AGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612
| ||| ||||| | ||| ||||| || ||||||| |||
Sbjct 86052 ATATCCTTTGATAAATCAACTTCCTCAACAGTCCTAAA 86015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556679646221000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |