Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq343 161 8e-35
seq296 98.7 8e-16
>seq343
Length=103200
Score = 161 bits (178), Expect = 8e-35
Identities = 927/1466 (63%), Gaps = 47/1466 (3%)
Strand=Plus/Plus
Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838
||||| || ||||| | |||||| | || || || || || || || || ||||| ||
Sbjct 5011 TTGTCAACAGTAAACTGAATAGCATTTGCAGCGGGTTTTGTTCGTAAGTAATACATTCCA 5070
Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898
||||||| || ||||||| || | ||||| | || || | || |||||
Sbjct 5071 GTTTTCAGTCCCATTTTCCATCCGTAAAAATGAATGGACGTTAATTTCCCATAATTGGGT 5130
Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958
| | | | ||||||||| || |||||||| || ||||| | || |||||||||| |
Sbjct 5131 TCAGCTACATGAATATTAAACGACTGACTTTGGTCTATAAAAGCTCCACGATCGGCAGAC 5190
Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018
|| ||| | || || |||||||| |||||||| || | | | | | |
Sbjct 5191 ATTTGAATTTGTGTCTTGACGGAAATTTCCCAAACCGTTTTATATATATTTTTTATATCA 5250
Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078
| ||| |||| ||||| |||| | || || ||||||||||||||||| |||
Sbjct 5251 TCTGGAATTTGCTCAATAGTCTGTATTGAACCATTATTTGCAATAATTTTGTTCTTCATA 5310
Query 129079 TGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTGA 129138
| || | | ||| ||| ||||||| | | | | | | || | ||||||
Sbjct 5311 TCGTCATCCCATAAACCACGTTCAGTCAAATCCTTGATAAGATGGTGATTAACAACTTGA 5370
Query 129139 AAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTCA 129198
|| ||||| | ||| || ||| |||| || | ||| | || ||||| |||
Sbjct 5371 AATTCACCACTGAGAACACGACGATTATAAACATTACTTGTGTAAGGTTCAAAGCTCTCA 5430
Query 129199 TTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAGTTT 129258
|| || || || || ||||| |||| || || ||||| || | | || || |||
Sbjct 5431 TTATTACCCAAAATCTGAGCAGTTGATGCTGTCGGCATTGGTGCAATTAAGAGTGAATTT 5490
Query 129259 CGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCAC--ATCGATGTGG 129316
|| | ||| || |||||| | || ||||| | ||| |||||| |||| ||||
Sbjct 5491 CGGAGACCAAACTTTTTAATTTTTTCTTTTAGAGCTTCCCAATCCCACAAATCG--GTGG 5548
Query 129317 GTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTAGG 129376
| || | || ||||| || ||||| |||| ||| | |||| | ||| |
Sbjct 5549 GAGTCTTATCCCACATATCATATTGTAATACACCTTTTGACACCGGACATCCATCGTAAG 5608
Query 129377 AATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAA 129436
|| | || | || ||| ||||| || || | |||||||| ||| ||||||
Sbjct 5609 TCTCATATGGTCCCAATTGTTCTGCTAATTCACAGCTGGACTCCAATGCACCATAATAAA 5668
Query 129437 TTGTTTCGGCAAT-TTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATACG 129494
||||||| ||| |||| || || || ||| || | || ||| || ||||| |
Sbjct 5669 TTGTTTC--AAATATTTGTTGATTTAAATTTTTCGCTTCGTTAGATTCATATGGCATTCT 5726
Query 129495 CAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTCT 129554
|| || ||| | || ||||| ||||||| || | || || || |||||| |
Sbjct 5727 CATCAAAATAAAAGCATCTGCCAATCCTTGAACTCCAATTCCAATAGGACGATGTCTAAA 5786
Query 129555 ATTGGA--TTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAA 129612
|| || ||| | | |||| ||||||||| || | || |||||||| || |||
Sbjct 5787 GTTTGACCGTTTAGCTTCTTCAAC--GGGATAGTAATTTACGTTAATAATTTTATTCAAA 5844
Query 129613 TTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACATCG 129672
||| | || ||||| || || | || || | | ||| | || || | | ||
Sbjct 5845 TTCCTTGTGACTATTTTTGTAACTTCCTTCAATTTGTGAAAGTCATATTCTCTTCGATTT 5904
Query 129673 ATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTG 129732
| |||||| ||| | | ||| || || ||||| || || ||| ||| | ||
Sbjct 5905 TGTTTGACAAACATATTTAAAGCAATTGATGCTAAATTACAAACTGCAACTTCATCCTT- 5963
Query 129733 TCACT---GTACTCGACAATTTCGGCGCACAAATT---ACTATTTTTAATGGTGCCCAAA 129786
||| || | || ||||| | || ||||| || | | || || || | |
Sbjct 5964 --ACTTGAATATTGTACTATTTCCGTACATAAATTCGAACAACGT---ATTGTCCCAAGA 6018
Query 129787 TGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTT 129846
| || |||||| |||| |||||| | ||| || |||| ||| || || || || |||
Sbjct 6019 TTCTGTTGATTTGATTTCCGGTTGCATGAATCCTTATACAGCATATAAGGTGTACCAGTT 6078
Query 129847 TCGACTTGCGTTTCGACAATGGTCCTGA---ACAAGTCTCGAGCCTTGATCTGTCTTACA 129903
|| ||||| | | ||||| | || |||| ||| | ||||| | || | ||
Sbjct 6079 TCTACTTGAG---CCTCAATGATTGCGAACCACAAATCTTGTGCCTTTA-CT---TGACG 6131
Query 129904 AATTTGCCACATTTC----TCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTAC 129959
||| | || ||| || || | |||| |||| ||||||| || ||||
Sbjct 6132 AATATACCTTCCTTCTGCTTCATAGCCTTCATAAAGTTTCACAAATTCCTCACC--GTAC 6189
Query 129960 GGTGTCGAGCA-ACGGCGATT--CACGCGGACACATCAAACTCCACATTCCATCCGCTTC 130016
| | || | | || | || | | |||||||| || ||||||| ||| |||
Sbjct 6190 GAT-TCAAAAAGACCGGGACTACTATTAGGACACATTAATGACCACATTTCATTGTTTTC 6248
Query 130017 GACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCT 130076
|| || ||| |||||||| || | ||||| || || |||| |||| ||| |
Sbjct 6249 AACCCGACGCATGAACAAATCTGGAATCCACAATGCATAAAACATGTCTCTAGCTCTGAC 6308
Query 130077 ATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGG 130136
|| || || | || || | || || || || |||| || | ||||| ||
Sbjct 6309 TTCTTCTTTTCCAGTATTTTTCTTTAAATCCAGAAATTCAAAAATATCACCATGCCAAGG 6368
Query 130137 TTCAACATAAATTGCCATTGCGCCCTTCCGT---TTGCCCCCTTGGTCAACGTGGCGCAC 130193
||| | ||| ||||| | ||||| ||| || || ||||||||||| | || |
Sbjct 6369 TTCCAAATATATTGCAAACGCGCCTGGACGTTTATTTCCACCTTGGTCAACATAACGTGC 6428
Query 130194 GGCATTGTTGTAGACTCGCAACATTG 130219
|| ||| ||||| |||| |||||||
Sbjct 6429 GGTATTATTGTATACTCTTAACATTG 6454
>seq296
Length=113092
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || ||||| || || ||||| |||| | ||||| || | |
Sbjct 113083 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAAACCATCACATTAGAAGTTGAGCCATCA 113024
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || ||| || |||||||| || || |||||||| || |||
Sbjct 113023 GACACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGAATTCCACCAGACCAA 112964
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || || || ||||| || || ||| || || | ||| |||||
Sbjct 112963 CAGCGTTTGATCTTCGCAGGAAAACAATTGGAAGATGGTCGTACATTGAGCGACTACAAT 112904
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || |||||||| || | ||||| ||| | || | || |||||
Sbjct 112903 ATCCAGAAAGAATCTACATTGCATTTGGTTCTTCGTCTTCGTGGAGG 112857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419594870804125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |