Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq442 170 4e-37
seq296 170 4e-37
seq10680 96.9 6e-15
seq17255 87.8 3e-12
>seq442
Length=86436
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||||||||| || ||||| || || ||||||||||||||||| || |||
Sbjct 24990 CCACCACGAAGGCGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTC 25049
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| ||| | ||||||||||| || || || || || || | | ||||| || ||||||
Sbjct 25050 AATGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGA 25109
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||| ||||||||||| |||||||| || || ||||| | || || |||
Sbjct 25110 ATTCCTTCCTTATCTTGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACT 25169
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| || || || ||||| | ||| |||||||| ||||||||
Sbjct 25170 TCGAGGGTAATTGTCTTACCCGTCAAGGTTTTGACGAAGATCTGCAT 25216
>seq296
Length=113092
Score = 170 bits (188), Expect = 4e-37
Identities = 178/234 (76%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
|||||||||||| ||||| || | ||||| || | || || ||||| ||||| || ||
Sbjct 112850 TTAATTTCCTCCACGAAGACGAAGAACCAAATGCAATGTAGATTCTTTCTGGATATTGTA 112909
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
||| | ||| | |||||||| || || || || ||||| || | | ||||||||
Sbjct 112910 GTCGCTCAATGTACGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTC 112969
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407
|||||||| ||||| |||||||| ||||||||||| || || || ||||||| ||
Sbjct 112970 TGGTGGAATTCCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTGTCTGATGG 113029
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||| || |||||||||||||| || | ||||||||||| || |||||
Sbjct 113030 CTCAACTTCTAATGTGATGGTTTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083
>seq10680
Length=1285
Score = 96.9 bits (106), Expect = 6e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405
|| |||||||| ||||| || ||||| || || ||||| || ||||| ||||| | |
Sbjct 1285 TCTGGTGGAATTCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCGATTGTGTCAGAT 1226
Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||| |||||||| |||||||| ||||| || | ||||||||||| || |||||
Sbjct 1225 GGTTCGACTTCCAATGTGATGGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 1170
>seq17255
Length=1118
Score = 87.8 bits (96), Expect = 3e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|||||||| |||||||| |||||||| ||||| || || ||||| || || || ||
Sbjct 13 TGTTGGTCTGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTTACATTTTCAATAGTA 72
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | || || ||||||||||| || ||||| || || | || || ||||| || |||
Sbjct 73 TCAGATGGCTCAACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTAACGAAAATTTGC 132
Query 68460 ATTATG 68465
||| ||
Sbjct 133 ATTCTG 138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921322584713000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |