Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq296 141 8e-29 >seq296 Length=113092 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | ||| ||||| | ||||||||||| || || ||||| |||||| Sbjct 112857 CCTCCACGAAGACGAAGAACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTC 112916 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| |||||| | |||||| || ||| |||| | |||||||||||| || ||| Sbjct 112917 AATGTACGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGA 112976 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||||||||| |||||| |||| | ||||| ||||| | | || || Sbjct 112977 ATTCCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTCAACT 113036 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || | ||||| || |||| ||| || || ||||| |||||| Sbjct 113037 TCTAATGTGATGGTTTTTCCTGTCAAAGTCTTGACGAAAATTTGCATG 113084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420001141902300