Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq767 114 1e-20
>seq767
Length=55330
Score = 114 bits (126), Expect = 1e-20
Identities = 262/392 (67%), Gaps = 2/392 (1%)
Strand=Plus/Minus
Query 20190 TGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACAT 20249
|||| || || ||||| || || || |||| ||| || || || | | | |||||||
Sbjct 37965 TGTAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTTGTAACAT 37906
Query 20250 GAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCA 20309
|||||| ||| || || || | || ||| ||||| || ||||||||||| | |||||
Sbjct 37905 GAGCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCCAAGACCCA 37846
Query 20310 TGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGAC 20369
| || | || || || || | || ||| | ||||| | ||| ||||||||||||
Sbjct 37845 TATCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAGCGACATAAAATTGAA 37786
Query 20370 ATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACA 20429
| ||||||| || ||||| ||||| | | |||| | || ||||| || | ||
Sbjct 37785 CGAGACAGTGACATGGTGGAAGTGCCATTTGTGGAATGTCCACTGGATTCCATGCGCTCA 37726
Query 20430 TAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGT 20489
|| || | | ||| | ||||| ||| || || | | | | |||||||
Sbjct 37725 ATATAATACGACGATCATTTGGATTGGCTTTGATGCGTTCAATGACATCCTTTAATTGGT 37666
Query 20490 CAAACCCCTGGCCTGTATAGTCAGCATCCGCGT-CCACGTACGCCGCCCCAAAGTGCCTC 20548
||| || |||||| ||| ||| ||| ||| | || || ||||| || | |
Sbjct 37665 CAATTCCTTGGCCTTCATATTCATCAT-CGCATGTTTTATATTTGGCACCAAAATGTCGC 37607
Query 20549 CACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580
||||| || || ||||| || |||||||| ||
Sbjct 37606 CACTGAAATCCATAAACTGGACCCAAATCACC 37575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441229215911000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |