Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq767 114 1e-20 >seq767 Length=55330 Score = 114 bits (126), Expect = 1e-20 Identities = 262/392 (67%), Gaps = 2/392 (1%) Strand=Plus/Minus Query 20190 TGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACAT 20249 |||| || || ||||| || || || |||| ||| || || || | | | ||||||| Sbjct 37965 TGTAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTTGTAACAT 37906 Query 20250 GAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCA 20309 |||||| ||| || || || | || ||| ||||| || ||||||||||| | ||||| Sbjct 37905 GAGCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCCAAGACCCA 37846 Query 20310 TGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGAC 20369 | || | || || || || | || ||| | ||||| | ||| |||||||||||| Sbjct 37845 TATCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAGCGACATAAAATTGAA 37786 Query 20370 ATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACA 20429 | ||||||| || ||||| ||||| | | |||| | || ||||| || | || Sbjct 37785 CGAGACAGTGACATGGTGGAAGTGCCATTTGTGGAATGTCCACTGGATTCCATGCGCTCA 37726 Query 20430 TAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGT 20489 || || | | ||| | ||||| ||| || || | | | | ||||||| Sbjct 37725 ATATAATACGACGATCATTTGGATTGGCTTTGATGCGTTCAATGACATCCTTTAATTGGT 37666 Query 20490 CAAACCCCTGGCCTGTATAGTCAGCATCCGCGT-CCACGTACGCCGCCCCAAAGTGCCTC 20548 ||| || |||||| ||| ||| ||| ||| | || || ||||| || | | Sbjct 37665 CAATTCCTTGGCCTTCATATTCATCAT-CGCATGTTTTATATTTGGCACCAAAATGTCGC 37607 Query 20549 CACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 ||||| || || ||||| || |||||||| || Sbjct 37606 CACTGAAATCCATAAACTGGACCCAAATCACC 37575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441229215911000