Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq296 131 1e-25
seq442 122 6e-23
seq17255 96.9 2e-15
>seq296
Length=113092
Score = 131 bits (144), Expect = 1e-25
Identities = 157/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| ||||| | ||||| ||||| || || ||||| ||||| | | | | |||||
Sbjct 112874 AACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTCAATGTACGACCATCTTC 112933
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
|||||||| || ||| | ||||||||||||||||| |||||||||||| |||||
Sbjct 112934 CAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTGTCTTG 112993
Query 15087 AAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
|| ||||| |||||| |||| || || || || || ||||| || |||||||
Sbjct 112994 GATCTTTGC-CTTTACATTTTCAATTGTGTCTGATGGCTCAACTTCTAATGTGATGGTTT 113052
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| ||||||| ||| || || |||||||||||
Sbjct 113053 TTCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083
>seq442
Length=86436
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|| ||||| ||||| || || |||||||| |||||||| ||||| | | | | |||
Sbjct 25005 AACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGACCATCT 25064
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
||||||||||| ||||| | |||||||||||||| || ||||||||||||||| ||
Sbjct 25065 TCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTATCT 25124
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144
||| || || ||| |||| || || || || || || | |||||| ||
Sbjct 25125 TGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTAATTGTC 25184
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||| |||| ||||| || || || |||||
Sbjct 25185 TTACCCGTCAAGGTTTTGACGAAGATCTGCAT 25216
>seq17255
Length=1118
Score = 96.9 bits (106), Expect = 2e-15
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105
||||||||||||||||| ||||||||||||||| || ||||| |||||| ||
Sbjct 4 ATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTTACATTT 63
Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165
|| |||||||| || || || |||||||| |||||||| || | ||||| ||
Sbjct 64 TCAATAGTATCAGATGGCTCAACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTAACG 123
Query 15166 AAAATTTGCAT 15176
|||||||||||
Sbjct 124 AAAATTTGCAT 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357278642517125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |