Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq296 131 1e-25 seq442 122 6e-23 seq17255 96.9 2e-15 >seq296 Length=113092 Score = 131 bits (144), Expect = 1e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| ||||| | ||||| ||||| || || ||||| ||||| | | | | ||||| Sbjct 112874 AACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTCAATGTACGACCATCTTC 112933 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||||||| || ||| | ||||||||||||||||| |||||||||||| ||||| Sbjct 112934 CAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTGTCTTG 112993 Query 15087 AAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 || ||||| |||||| |||| || || || || || ||||| || ||||||| Sbjct 112994 GATCTTTGC-CTTTACATTTTCAATTGTGTCTGATGGCTCAACTTCTAATGTGATGGTTT 113052 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | ||||||| ||| || || ||||||||||| Sbjct 113053 TTCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083 >seq442 Length=86436 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || ||||| ||||| || || |||||||| |||||||| ||||| | | | | ||| Sbjct 25005 AACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGACCATCT 25064 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 ||||||||||| ||||| | |||||||||||||| || ||||||||||||||| || Sbjct 25065 TCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTATCT 25124 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| || || ||| |||| || || || || || || | |||||| || Sbjct 25125 TGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTAATTGTC 25184 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| |||| ||||| || || || ||||| Sbjct 25185 TTACCCGTCAAGGTTTTGACGAAGATCTGCAT 25216 >seq17255 Length=1118 Score = 96.9 bits (106), Expect = 2e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105 ||||||||||||||||| ||||||||||||||| || ||||| |||||| || Sbjct 4 ATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTTACATTT 63 Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165 || |||||||| || || || |||||||| |||||||| || | ||||| || Sbjct 64 TCAATAGTATCAGATGGCTCAACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTAACG 123 Query 15166 AAAATTTGCAT 15176 ||||||||||| Sbjct 124 AAAATTTGCAT 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357278642517125