Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq442 100 7e-16
>seq442
Length=86436
Score = 100 bits (110), Expect = 7e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| || || ||||| ||||||| ||||||||| ||| ||
Sbjct 24996 CGAAGGCGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTA 25055
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| | || ||||| || ||||| | |||||| || || || |||||||
Sbjct 25056 CGACCATCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCT 25115
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||| || ||| | ||||| | || || || || |
Sbjct 25116 TCCTTATCTTGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGG 25175
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||||||||| | ||||| || || || ||
Sbjct 25176 GTAATTGTCTTACCCGTCAAGGTTTTGACGAAGATCTG 25213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178528494118675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |