Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq782 105 8e-18 >seq782 Length=54866 Score = 105 bits (116), Expect = 8e-18 Identities = 279/421 (66%), Gaps = 4/421 (1%) Strand=Plus/Minus Query 167359 CCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAAAG 167418 || |||||||||||||||| || ||||| | |||||| || | | |||| | ||| | Sbjct 42923 CCAGTACCAATACCTTCAGCGCCATTTACAAGAACCATTGGAATAATTGGAACATAATAT 42864 Query 167419 TCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGGGA 167478 || || ||||| || || |||||||| |||| || | | |||||| | ||| Sbjct 42863 TCAGGCTCAATACGCTGATTGTCTTCATCCAAAAAGTTAAGCAAAGGATCATCATGTGGA 42804 Query 167479 TCGAAGAGCTTTCGAGCCTCCTTG-GTAAGCTTCGTAAAGATGTACCTCGTCTGAGACGC 167537 | ||||| | |||| || | | | |||| |||| || || || | | | | Sbjct 42803 TGGAAGATGTGACGAG-CTAATGGCGAAAGCATCGTGAAAATATAACGAGGACTTGCAGA 42745 Query 167538 ATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTT 167597 ||| || || ||| | | || |||||||| |||||| || | || | ||| || || Sbjct 42744 ATCTTTTCCTCCCGTTAAACGCGTACCAAACTGACCATTAGGTTGAAGCAAATTAATATT 42685 Query 167598 ATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGC-GAGGGAAACTTCGC 167656 || || ||||| | ||||| || || || | | | || || |||||||| | Sbjct 42684 GTTACTTCCGACATAATTTTGAGCCAAATTAACAATTG-TACTGCAAAGTGAAACTTCAC 42626 Query 167657 CGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCAT 167716 | || || || ||||||| ||| || || | | |||||||| ||||| || | ||| | Sbjct 42625 CATGATGATATGCACTCTGTTCGGCAACGGAACCAGCCAACTGAGCAACTTTAACCTCCT 42566 Query 167717 CTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCAT 167776 |||| ||| || || |||| | | || | || |||||| ||| || | ||||| Sbjct 42565 TTTTGTCATTACGTTTAAAGCATGTAAAAATGATTTTACGTTGACCAGGCTTAAAACCAT 42506 Query 167777 C 167777 | Sbjct 42505 C 42505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588784398745000