Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1563 134 2e-26
>seq1563
Length=26157
Score = 134 bits (148), Expect = 2e-26
Identities = 404/617 (65%), Gaps = 9/617 (1%)
Strand=Plus/Minus
Query 154443 ATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCCTGTG 154502
||| ||||||| ||| ||||||||||| |||||| || || ||||| | || ||
Sbjct 24412 ATGATTCCACTCGGCTCCTGCACAATGAAGTTAAATTCAACAACAGAAATGATTCCATGC 24353
Query 154503 TCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTAT-GATACAGACCATGGGTTA 154561
|||| | ||| || || | |||||| | |||| | ||| ||| | | || ||
Sbjct 24352 TCATTCCGTCACTTTACTGACATTCATCCATTTGCACCAGTTGAT-CAGGCTAAAGGATA 24294
Query 154562 TCAGAAAATTATAGATGACTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTCTAT 154621
||| ||||| | || | |||| | ||||| ||||| || | ||| ||
Sbjct 24293 TCATAAAATGTTTTCGGAACTTGAGAATGACCTCTGTGAGATCACTGGATATGACAAAAT 24234
Query 154622 ATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGC 154681
||||| ||||| ||| || |||| ||||| ||||| ||||| ||||| | |
Sbjct 24233 CTCATTGCAACCAAACAGCGGTGCACAAGGTGAATATGCTGGACTTCGTGCAATTCGTGG 24174
Query 154682 ATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACA 154741
||| ||| ||| ||| | || | |||| ||| || || || || | ||||| ||
Sbjct 24173 ATATCATGAAGCTAATGGACAACATCACAGAACTGTCTGCTTAATTCCTGTCTCAGCTCA 24114
Query 154742 TGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTC-AAGT--G 154798
|||||||||||| ||||||||| |||||||| |||| ||| | | || |||| |
Sbjct 24113 TGGAACTAATCCAGCTAGTGCTCAAATGGCAGGCATGAGAGTCGAACCGATCAAAGTTAG 24054
Query 154799 TGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACA-- 154856
| | ||||| | || ||| | || | || | || || | | |||| ||
Sbjct 24053 AGCTTCCGATGGAACAATTGACTTGGTTCATTTGAAGGAAAAGGC--TGAAGAATTCAGC 23996
Query 154857 TTTGAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAAC 154916
||| |||||||| | ||| | ||||| ||||| || |||| | || || | |
Sbjct 23995 AACGAATTGTCATGTCTGATGCTCACATATCCATCAACTAATGGAATTTTCGAGGATCAT 23936
Query 154917 ATTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCA 154976
|| | | ||| | | ||||| | |||| |||||||| ||| | ||||| ||
Sbjct 23935 GTTGCTGATGTTTGTGATTTGATTCATAAGCATGGCGGTCAGGTGTATTTGGATGGTGCT 23876
Query 154977 AATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCAT 155036
||| | ||||||||||| ||| | | ||| |||| ||||| | ||||| | |||
Sbjct 23875 AATATGAATGCACAGGTCGGATTGTGCAGACCGGGTGATTATGGATCGGATGTGTCGCAT 23816
Query 155037 CTAAACTTACATAAAAC 155053
| || || ||||| ||
Sbjct 23815 TTGAATTTGCATAAGAC 23799
Score = 89.7 bits (98), Expect = 6e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 155382 CTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCTGTGTTAGGAACTATGATG 155441
||||||||||||||||| |||||||| ||| | || ||||| || ||||||| |||||
Sbjct 23218 CTTATGGACTATGGATTTCATGCACCAACAATGTCATGGCCAGTTCAAGGAACTTTGATG 23159
Query 155442 GTAGAACCCACAGAGTCTGAGTCTCTAGATGAACTACAAAGATT 155485
| ||||| |||||||||||| | || ||||| | |||||
Sbjct 23158 ATTGAACCAACAGAGTCTGAGGATAAGGAGGAACTTGATAGATT 23115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579024374836000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |