Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1563 109 6e-19
>seq1563
Length=26157
Score = 109 bits (120), Expect = 6e-19
Identities = 307/465 (66%), Gaps = 11/465 (2%)
Strand=Plus/Minus
Query 159271 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 159330
||||| ||||| || | ||| || ||||| ||||| ||| || |||| |||||
Sbjct 24259 TGTGAGATCACTGGATATGACAAAATCTCATTGCAACCAAACAGCGGTGCACAAGGTGAA 24200
Query 159331 TATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAAT 159390
||||| ||||| ||||| | | ||| ||| ||| ||| | || | |||| |
Sbjct 24199 TATGCTGGACTTCGTGCAATTCGTGGATATCATGAAGCTAATGGACAACATCACAGAACT 24140
Query 159391 GTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGG 159450
|| || || || || | ||||| |||||||||||||| || || ||||||||
Sbjct 24139 GTCTGCTTAATTCCTGTCTCAGCTCATGGAACTAATCCAGCTAGTGCTCAAATGGCAGGC 24080
Query 159451 ATGAAAGTTGTAGGTGTCAA-GTGTGATGAT--GATGGCAACATAGACATCAAAGATCTA 159507
|||| ||| | | |||| || || | ||||| | || ||| | || |
Sbjct 24079 ATGAGAGTCGAACCGATCAAAGTTAGAGCTTCCGATGGAACAATTGACTTGGTTCATTTG 24020
Query 159508 GAGAAGAAAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATATCCAT 159565
|| | || || | | |||| || ||| |||||||| | ||| | ||||||||||
Sbjct 24019 AAGGAAAAGGC--TGAAGAATTCAGCAACGAATTGTCATGTCTGATGCTCACATATCCAT 23962
Query 159566 CTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTG--TTCATGAGAA 159623
| || |||| | || || | ||| | ||| | | |||| ||||| || |
Sbjct 23961 CAACTAATGGAATTTTCGAGG--ATCATGTTGCTGATGTTTGTGATTTGATTCATAAGCA 23904
Query 159624 TGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACC 159683
||| |||||||| ||| | |||||||| ||| | ||||||||||| || | | |||
Sbjct 23903 TGGCGGTCAGGTGTATTTGGATGGTGCTAATATGAATGCACAGGTCGGATTGTGCAGACC 23844
Query 159684 ATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGAC 159728
|||| ||||| | ||||| | ||| | || || ||||||||
Sbjct 23843 GGGTGATTATGGATCGGATGTGTCGCATTTGAATTTGCATAAGAC 23799
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 160057 CTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCTGTGTTAGGAACTATGATG 160116
||||||||||||||||| |||||||| ||| | || ||||| || ||||||| |||||
Sbjct 23218 CTTATGGACTATGGATTTCATGCACCAACAATGTCATGGCCAGTTCAAGGAACTTTGATG 23159
Query 160117 GTAGAACCAACAGAGTCTGAG 160137
| ||||||||||||||||||
Sbjct 23158 ATTGAACCAACAGAGTCTGAG 23138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587859899594000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |