Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1563 109 6e-19 >seq1563 Length=26157 Score = 109 bits (120), Expect = 6e-19 Identities = 307/465 (66%), Gaps = 11/465 (2%) Strand=Plus/Minus Query 159271 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 159330 ||||| ||||| || | ||| || ||||| ||||| ||| || |||| ||||| Sbjct 24259 TGTGAGATCACTGGATATGACAAAATCTCATTGCAACCAAACAGCGGTGCACAAGGTGAA 24200 Query 159331 TATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAAT 159390 ||||| ||||| ||||| | | ||| ||| ||| ||| | || | |||| | Sbjct 24199 TATGCTGGACTTCGTGCAATTCGTGGATATCATGAAGCTAATGGACAACATCACAGAACT 24140 Query 159391 GTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGG 159450 || || || || || | ||||| |||||||||||||| || || |||||||| Sbjct 24139 GTCTGCTTAATTCCTGTCTCAGCTCATGGAACTAATCCAGCTAGTGCTCAAATGGCAGGC 24080 Query 159451 ATGAAAGTTGTAGGTGTCAA-GTGTGATGAT--GATGGCAACATAGACATCAAAGATCTA 159507 |||| ||| | | |||| || || | ||||| | || ||| | || | Sbjct 24079 ATGAGAGTCGAACCGATCAAAGTTAGAGCTTCCGATGGAACAATTGACTTGGTTCATTTG 24020 Query 159508 GAGAAGAAAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATATCCAT 159565 || | || || | | |||| || ||| |||||||| | ||| | |||||||||| Sbjct 24019 AAGGAAAAGGC--TGAAGAATTCAGCAACGAATTGTCATGTCTGATGCTCACATATCCAT 23962 Query 159566 CTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTG--TTCATGAGAA 159623 | || |||| | || || | ||| | ||| | | |||| ||||| || | Sbjct 23961 CAACTAATGGAATTTTCGAGG--ATCATGTTGCTGATGTTTGTGATTTGATTCATAAGCA 23904 Query 159624 TGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACC 159683 ||| |||||||| ||| | |||||||| ||| | ||||||||||| || | | ||| Sbjct 23903 TGGCGGTCAGGTGTATTTGGATGGTGCTAATATGAATGCACAGGTCGGATTGTGCAGACC 23844 Query 159684 ATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGAC 159728 |||| ||||| | ||||| | ||| | || || |||||||| Sbjct 23843 GGGTGATTATGGATCGGATGTGTCGCATTTGAATTTGCATAAGAC 23799 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 160057 CTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCTGTGTTAGGAACTATGATG 160116 ||||||||||||||||| |||||||| ||| | || ||||| || ||||||| ||||| Sbjct 23218 CTTATGGACTATGGATTTCATGCACCAACAATGTCATGGCCAGTTCAAGGAACTTTGATG 23159 Query 160117 GTAGAACCAACAGAGTCTGAG 160137 | |||||||||||||||||| Sbjct 23158 ATTGAACCAACAGAGTCTGAG 23138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587859899594000