Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq442 136 9e-27
seq296 134 3e-26
seq17 89.7 1e-12
seq17255 86.0 1e-11
>seq442
Length=86436
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || | |||||| || ||||||||||| || ||||| ||| | || | |||||
Sbjct 25004 CAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGACCATC 25063
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| | || || || || ||||| | || ||||| ||||| ||||| ||||| || ||
Sbjct 25064 TTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTATC 25123
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|||||| || |||||| || ||||| ||||| || || ||||| ||||||| ||
Sbjct 25124 TTGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTAATTGT 25183
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || ||||| ||||| ||||| | |||||
Sbjct 25184 CTTACCCGTCAAGGTTTTGACGAAGATCTGCAT 25216
>seq296
Length=113092
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || ||||| || |||||||| ||| | || | |||||||| | || || |||
Sbjct 112887 GTAGATTCTTTCTGGATATTGTAGTCGCTCAATGTACGACCATCTTCCAATTGTTTTCCT 112946
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|||||||| | || ||||||||||| ||||| |||||||||||||| || ||| |||
Sbjct 112947 GCGAAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTGTCTTGGATCTTTGCCTTT 113006
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || ||||| ||||| || || ||||| | || | || ||||||||||||||
Sbjct 113007 ACATTTTCAATTGTGTCTGATGGCTCAACTTCTAATGTGATGGTTTTTCCTGTCAAAGTC 113066
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 113067 TTGACGAAAATTTGCAT 113083
>seq17
Length=426642
Score = 89.7 bits (98), Expect = 1e-12
Identities = 139/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 125523 CCTTCCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGTTTTGAGAGACTTCGAAA 125582
|||||| ||||||||||| | || || ||||| ||| | ||||||| | |||||||
Sbjct 196388 CCTTCCGAAGAAACACGGTCGTGGTGGTCAATCAGCTCTTCGTTTTGCACGTCTTCGAAT 196447
Query 125583 AGAAAAGAGACACAACTATTTGAGGAAAGTCGCAGAGAATGCAACTCAA-TGTTTTTTGC 125641
|||||| | ||||| ||| |||| ||||| || || |||||||||| | || || |
Sbjct 196448 GGAAAAGCGCCACAATTATGTGAGAAAAGTGGCTGAAGTTGCAACTCAATTATTCATTTC 196507
Query 125642 AAGACAACAAGTGCAACGTCATTGGGATTGTCATTGCTGGATCGGCAGAGTTCAAAACAA 125701
|| || | ||| |||| | ||| | | ||||||| || || || ||||| ||
Sbjct 196508 AA-ACGATAAGCCCAACATTGCTGGCCTCATTCTTGCTGGTTCTGCTGATTTCAAGACCG 196566
Query 125702 AGCTTCTGGAATCTGA 125717
| ||| |||||||
Sbjct 196567 AACTTAGTCAATCTGA 196582
>seq17255
Length=1118
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 195007 AAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066
||||| | || ||||||||||| ||||| ||||| || ||||| ||||| ||| ||
Sbjct 1 AAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTTACA 60
Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126
|| ||||| || || || || ||||| | ||||| || || || || || |||||
Sbjct 61 TTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTA 120
Query 195127 ACGAACACTTGCATT 195141
||||| | |||||||
Sbjct 121 ACGAAAATTTGCATT 135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109111648561175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |