Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq119 333 3e-86
seq205 87.8 2e-12
>seq119
Length=197918
Score = 333 bits (368), Expect = 3e-86
Identities = 606/881 (69%), Gaps = 12/881 (1%)
Strand=Plus/Plus
Query 36828 TAAAAATCTTCATCTAACGTAAATTTTATTTCCTTATTACTATTCATAACTCCCATTTTT 36887
|| ||||| | ||||| || || | ||| | | |||| ||||||||| | |||
Sbjct 167101 TAGAAATCAGCGTCTAATGTGAAAACTTGTTCTTGACGACTAGACATAACTCCACTCTTT 167160
Query 36888 TGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCC 36947
|||||||| ||||| || |||||| || |||||||| || || ||||| ||| ||||
Sbjct 167161 TGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCCCTCAAGTGAAATAAATTCC 167220
Query 36948 ATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGAAGC 37007
||||| |||||||| |||||||| | || | | ||||| || |
Sbjct 167221 ATAAATGAGAATGGATTTTTGGTATTATAGACTTTATCAAGTCCCAATTCACCCAATAAA 167280
Query 37008 CTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTT 37067
||| ||||||||||||||||| | | ||||| ||| | || || || | | ||
Sbjct 167281 TGATCAGCAACAAATTCTATGTACTGAGTCATTAAATCACAATTCATGCCCAACATCTTA 167340
Query 37068 ACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTA 37127
||||||| ||| || | |||| || || ||| ||||||| ||| | | || | |
Sbjct 167341 ACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTTACAGCCTCTGTGATAATTTCA 167400
Query 37128 ACAATAACTTCTTCAGTTGGGGGATATTTT---AAATATTTAAACAATAAACATGCAAAA 37184
|| | || ||| |||| || | | | | || ||| ||| ||| ||||||||
Sbjct 167401 ACTA---CTCTTTCCTTTGGTGGCTTCTGTTCAAGATGTTTGTACATTAAGCATGCAAAG 167457
Query 37185 TCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATT 37244
|||| ||| | ||||| ||||| || | |||||| ||||| || || |||||||||
Sbjct 167458 TCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTTGAAAATGTCAACCCTGGCATT 167517
Query 37245 AAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCA 37304
|| ||||| || |||||||||||||| |||||||| ||| ||||||||| |||||
Sbjct 167518 AATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTACCACTAAAGAAAATCCCTTCG 167577
Query 37305 ACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttt 37364
|| |||||||| || | || ||| ||| || ||| | | | || ||||| |||
Sbjct 167578 ACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCATTCTTGCTGGATATCCAATTT 167637
Query 37365 tttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAG 37424
| ||| || ||||| ||||||||| || ||| |||||||| || || | |||
Sbjct 167638 AAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTCTCAATTGCATTGAATAAGAAG 167697
Query 37425 t-ttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTG 37483
| | ||| | |||| | |||||||| ||||||| || ||||| || |||||
Sbjct 167698 TCACGCTGCTTTGC-ATCTCTAATATAAGTTTCAATTAATATTGAGTACATCTCCGAGTG 167756
Query 37484 AATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC 37543
| |||||| ||||| || || || ||||| || | | |||||| | | |||||| ||
Sbjct 167757 TACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGAGCTTCTGGAACTTGAACTTC 167816
Query 37544 GTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGC 37603
| | || | || | ||| || ||||| || || |||||| || |||||||||||
Sbjct 167817 CTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCATCAGATGCAGCAAAGAAAGC 167876
Query 37604 AAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAATTTTTTCCAATCATTAATA 37661
| |||| |||||||| | || || |||| | || ||||| || | |||
Sbjct 167877 TAATACATGCGAGATAAAATGACGCTCTGAATCCTTGAGA--TTGTTCCAGTCTTCCATA 167934
Query 37662 TCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC 37702
|||||||||||||| ||||| || || ||||| || || ||
Sbjct 167935 TCTTTTGATAAATCGACTTCCTCGACTGTCCAGAAGCTGGC 167975
>seq205
Length=143123
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/137 (74%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625
||||||||||| ||||||||| || ||||| ||||| | |||| ||||| |||
Sbjct 86143 TTTTCATTAACGATCCCATCAGATGCAGCAAAAAAAGCTAATACATGAGAGATAAATTGT 86084
Query 37626 CTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCA 37685
| ||| ||| | | | |||||| | | ||||| ||||||||||||||||| |||
Sbjct 86083 CGCTCAGTCTTTAAG--TCTAATCCAATAAGTCATATCCTTTGATAAATCAACTTCCTCA 86026
Query 37686 ACGGTCCAAAAACTTGC 37702
|| |||| |||||| ||
Sbjct 86025 ACAGTCCTAAAACTAGC 86009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592124111941000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |