Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq296 152 4e-32
seq442 145 6e-30
seq17255 98.7 8e-16
>seq296
Length=113092
Score = 152 bits (168), Expect = 4e-32
Identities = 173/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298
||||||||| | | ||| | ||| ||||| | ||||||||||| || |||||||| ||
Sbjct 112853 ATTTCCTCCACGAAGACGAAGAACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTC 112912
Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358
| | || | |||| |||||||| || ||||| || |||||||||||||| || ||
Sbjct 112913 GCTCAATGTACGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGG 112972
Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418
||||| |||||||| ||||| || ||| |||||| |||| | ||||| || | ||
Sbjct 112973 TGGAATTCCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTC 113032
Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||||| | |||| ||||| || || ||||| || || || || ||||||
Sbjct 113033 AACTTCTAATGTGATGGTTTTTCCTGTCAAAGTCTTGACGAAAATTTGCATG 113084
>seq442
Length=86436
Score = 145 bits (160), Expect = 6e-30
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314
|| || ||||| ||||| || || |||||||| || ||||| ||| | || | ||
Sbjct 25002 CGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGACCA 25061
Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374
|| || ||||| || || ||||| ||||||||||||||||| || ||||| ||||| |||
Sbjct 25062 TCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTA 25121
Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434
|||||||| || || ||| |||| | |||||||| | || ||||| || || |
Sbjct 25122 TCTTGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTAATT 25181
Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472
|| || || || || ||||| || || |||||||||||
Sbjct 25182 GTCTTACCCGTCAAGGTTTTGACGAAGATCTGCATGGT 25219
>seq17255
Length=1118
Score = 98.7 bits (108), Expect = 8e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 101336 AATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACA 101395
|| |||||||||||||| || || ||||| ||||| |||||||| ||||| ||||||
Sbjct 1 AAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTTACA 60
Query 101396 ATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTT 101455
|||| | ||| ||||| | || ||||| | || | ||||| || ||||| |||||
Sbjct 61 TTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTA 120
Query 101456 ACAAATATCTGCAT 101469
|| || || |||||
Sbjct 121 ACGAAAATTTGCAT 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396152708540925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |