Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq77 102 1e-16 >seq77 Length=231729 Score = 102 bits (112), Expect = 1e-16 Identities = 183/266 (69%), Gaps = 1/266 (0%) Strand=Plus/Plus Query 197026 TCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGA 197085 ||||| || ||||| || || || || ||||| || || || | || || || Sbjct 49825 TCCTCATCACTAAATCCAGTTCCAATTTTACATATACTTTGATATTCGTCATTTTCCTGA 49884 Query 197086 TTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAG 197145 | ||||| | | ||||| | ||||| |||| |||| || || || | || Sbjct 49885 TCATAACATCCCAACAAGAAGCCACCGTACATTCCAGTTCGTTTGCCTTTTCCTCTATAG 49944 Query 197146 CCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGT 197205 ||||| | ||| || | ||| || | |||| || ||| || ||||||||||| ||| Sbjct 49945 CCTCCTAAAACGACTAAATCAAGCGAATCGCCAACACCTGACAAATAATCTTTCTTAAGT 50004 Query 197206 TTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTG 197265 || |||||| | || ||||| || ||||| ||||| ||||| | | ||| || || ||| Sbjct 50005 TTAAGCCAGTTCCTGGATCTTTTTGCAATTTCGTATGTTGCTTCTTTGTCGAGAGTTTTG 50064 Query 197266 ATCATCAATCCCTCGCAATCTTCCTT 197291 | ||| ||||| || |||| |||||| Sbjct 50065 ACCATTAATCCTTCACAAT-TTCCTT 50089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676509451402000