Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq6 100 2e-16
seq442 87.8 1e-12
>seq6
Length=649598
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 9055 TCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTA 9114
||| ||||||| |||||||||||| ||||||| || ||||||||||| | || || ||
Sbjct 425520 TCTTCCAGTGTTGGATAAAAGATTCGTTCACAGATCAATTGAGCAATACGATCGCCTTTG 425461
Query 9115 TTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAA 9174
|| ||| || || |||||||| |||| || || || | || || || ||
Sbjct 425460 GCGACATTAAAATCGACATCAGAATGATTAAACATGACAACACCTAAATTTCCTCTATAG 425401
Query 9175 TCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGAGCGG 9234
|| || || | || |||||||| || || ||||| | || | |||| |||||| ||
Sbjct 425400 TCTTCGTCTACAACTCCAGCACCAACATCAATGAAATTTTTTGCTGCTAATCCAGAACGT 425341
Query 9235 GGCGCGATTCGACCGTAGCATCC 9257
|| || ||||| || || || ||
Sbjct 425340 GGTGCAATTCGTCCATAACAGCC 425318
>seq442
Length=86436
Score = 87.8 bits (96), Expect = 1e-12
Identities = 153/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||||||| || || || || ||||||||| || ||||| || | | |||
Sbjct 24999 AGGCGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGA 25058
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || || || || || ||||| |||| ||||||||||| | |||| || |||
Sbjct 25059 CCATCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCC 25118
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || |||||| || ||| | | | || || | ||| || || | |||
Sbjct 25119 TTATCTTGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTA 25178
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGT 48771
|| || || |||||||| ||||| || || |||||||| ||||
Sbjct 25179 ATTGTCTTACCCGTCAAGGTTTTGACGAAGATCTGCATGGTGT 25221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380816774331075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |