Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq296 84.2 2e-11
>seq296
Length=113092
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || || || || || || |||||||| || ||| || || |||
Sbjct 113083 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAAACCATCACATTAGAAGTTGAGCCATCA 113024
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| ||| ||| |||||||| ||| | || ||| |||
Sbjct 113023 GACACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGAATTCCACCAGACCAA 112964
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||| | | ||||| || || ||||||||||||||| | || || ||| || ||
Sbjct 112963 CAGCGTTTGATCTTCGCAGGAAAACAATTGGAAGATGGTCGTACATTGAGCGACTACAAT 112904
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762
|| || ||||||||||| |||| ||||
Sbjct 112903 ATCCAGAAAGAATCTACATTGCATTTGGT 112875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425269870238475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |