Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq343 168 3e-37
>seq343
Length=103200
Score = 168 bits (186), Expect = 3e-37
Identities = 264/378 (70%), Gaps = 0/378 (0%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
||| || |||||||||||||||| ||||||||| | ||||| ||||| | |||||||||
Sbjct 6258 CATGAACAAATCTGGAATCCACAATGCATAAAACATGTCTCTAGCTCTGACTTCTTCTTT 6317
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
||| ||| || |||| ||| | || ||||||||||| ||||| ||||| |||||
Sbjct 6318 TCCAGTATTTTTCTTTAAATCCAGAAATTCAAAAATATCACCATGCCAAGGTTCCAAATA 6377
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
|| ||||| ||| | ||| ||||||||| || || || | ||| || | |||
Sbjct 6378 TATTGCAAACGCGCCTGGACGTTTATTTCCACCTTGGTCAACATAACGTGCGGTATTATT 6437
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
| | ||| | ||||||||||| | ||| |||||| || ||||| | | || | |
Sbjct 6438 GTATACTCTTAACATTGGAACAAGGCCATTTGAAATCCCATTTGTACCAGCTATATATGT 6497
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232
|||| | | || ||| ||| ||| || ||| |||||||| || |||| ||
Sbjct 6498 TCCTTTTGCTCGAATGCAATGAACATTAACACCAATTCCACCTGCTGATTTGCTTATTAA 6557
Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292
||| || | | | |||||| |||| || | || |||| || |||| || |||
Sbjct 6558 TGCGCATTGTTTTAATGTATCATAAATACCCTCAATAGAATCATCTGACATTGATAGTAA 6617
Query 26293 AAAACAAGAAGATAATTG 26310
|| || || ||||||||
Sbjct 6618 GAAGCATGAGGATAATTG 6635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252959740851875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |