Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1563 129 7e-25
>seq1563
Length=26157
Score = 129 bits (142), Expect = 7e-25
Identities = 454/700 (65%), Gaps = 13/700 (2%)
Strand=Plus/Plus
Query 138234 GTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCT 138293
|||||||| ||||| | ||| | ||||| | ||||| |||| ||| | | ||
Sbjct 23799 GTCTTATGCAAATTCAAATGCGACACATCCGATCCATAATCACCCGGTCTGCACAATCCG 23858
Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353
||||||||||| | ||| |||||||| | ||| |||||||| |||| | ||||| |
Sbjct 23859 ACCTGTGCATTCATATTAGCACCATCCAAATACACCTGACCGCCATGCTTATGAATCAAA 23918
Query 138354 TTACATA--TCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCA 138411
| ||| | || | ||| | | |||| | ||| ||| ||||||||||| | ||
Sbjct 23919 TCACAAACATCAGCAACATGATCCTCGAAAATTC--CATTAGTTGATGGATATGTGAGCA 23976
Query 138412 TAATACATGAGAGTTCAAA--TGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTC 138469
| | |||||| | ||| || |||| | | || || | || | || | |||
Sbjct 23977 TCAGACATGACAATTCGTTGCTGAATTCTTCA--GCCTTTTCCTTCAAATGAACCAAGTC 24034
Query 138470 TATGTTGCCATCATCATCAC--ACTT-GACACCTACAACTTTCATTCCTGCCATGACTGC 138526
|| | ||||| | | | |||| || | | ||| |||| |||||||| ||
Sbjct 24035 AATTGTTCCATCGGAAGCTCTAACTTTGATCGGTTCGACTCTCATGCCTGCCATTTGAGC 24094
Query 138527 ACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC 138586
|||||| |||||||||||||| ||||| | || || | || ||| |||| | || |
Sbjct 24095 ACTAGCTGGATTAGTTCCATGAGCTGAGACAGGAATTAAGCAGACAGTTCTGTGATGTTG 24154
Query 138587 TCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCC 138646
||| ||| ||||||| | | ||||| ||||| ||||| ||||| |||| ||
Sbjct 24155 TCCATTAGCTTCATGATATCCACGAATTGCACGAAGTCCAGCATATTCACCTTGTGCACC 24214
Query 138647 TGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAA 138706
||| ||||| ||||| || ||| | || ||||| ||||| | |||| |
Sbjct 24215 GCTGTTTGGTTGCAATGAGATTTTGTCATATCCAGTGATCTCACAGAGGTCATTCTCAAG 24274
Query 138707 GTCATCTATTATCTTTTGATAACCCATGGTCTGTATC-ATAGGTGTATGTGGATGCACGT 138765
|| | || || ||||| || | | ||| ||| | |||| | |||||| | ||
Sbjct 24275 TTCCGAAAACATTTTATGATATCCTTTAGCCTG-ATCAACTGGTGCAAATGGATGAATGT 24333
Query 138766 TGGCAAATTCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGC 138825
| ||| | |||| || |||| ||||| || || ||||| ||||||||||
Sbjct 24334 CAGTAAAGTGACGGAATGAGCATGGAATCATTTCTGTTGTTGAATTTAACTTCATTGTGC 24393
Query 138826 AACTACCAAGTGGAACCATACCATTTACTAATGAGAAATCTTTAGAGCATAACTCATAGA 138885
| || ||||||| ||| | ||||| || | ||| ||| | || | |
Sbjct 24394 AGGAGCCGAGTGGAATCATTGAGTGAACTAAGGATATATCCTTATTCTCAAGCTGCTTCA 24453
Query 138886 TATATCTCATCATGTCAGTTTCACTGTGATACTTATTGAA 138925
| || || | ||| | ||||||||||| ||||| |||
Sbjct 24454 TGTACCTGACCATTCTGGATTCACTGTGATGCTTATGGAA 24493
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 137825 CTCAGACTCTGTGGGTTCTACCATCATAGTTCCTAACACAGGCCACGATAGTGTAGGTGC 137884
|||||||||||| ||||| | ||||| ||||||| || ||||| || | ||| |||||
Sbjct 23138 CTCAGACTCTGTTGGTTCAATCATCAAAGTTCCTTGAACTGGCCATGACATTGTTGGTGC 23197
Query 137885 ATGAAATCCATAGTCCATAAG 137905
|||||||||||||||||||||
Sbjct 23198 ATGAAATCCATAGTCCATAAG 23218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578810044583000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |