Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq119 264 2e-65
seq17255 122 2e-22
seq296 107 3e-18
>seq119
Length=197918
Score = 264 bits (292), Expect = 2e-65
Identities = 540/815 (66%), Gaps = 3/815 (0%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| |||||| ||| ||| |||||| |||||||| || || || | ||| || ||
Sbjct 167158 TTTTGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCCCTCAAGTGAAATAAAT 167217
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAAT 38951
| |||||| |||||||||||||||||||| ||| || | |||| || |||
Sbjct 167218 TCCATAAATGAGAATGGATTTTTGGTATTATAGACTTTATCAAGTCCCAATTCACCCAAT 167277
Query 38952 AATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAAT 39011
|| ||| || |||||||| | || || |||||| ||||||||||| ||||| |
Sbjct 167278 AAATGATCAGCAACAAATTCTATGTACTGAGTCATTAAATCACAATTCATGCCCAACATC 167337
Query 39012 TTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatc 39071
|||| ||| | ||| ||| | |||||| || || |||| |||||| | | | || ||
Sbjct 167338 TTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTTACAGCCTCTGTGATAATT 167397
Query 39072 ataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATGCA 39131
|| || | | |||| | || | || || ||| || || | ||| ||||||
Sbjct 167398 TCAACTACTCTTTCCTTTGGTGGCTTCTGTTCAAGATGTTT---GTACATTAAGCATGCA 167454
Query 39132 AAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGC 39191
|| || ||| | |||||||| || || |||| |||||| ||| || || ||||||
Sbjct 167455 AAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTTGAAAATGTCAACCCTGGC 167514
Query 39192 ATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCC 39251
|||||||||||||| |||| ||||||||| | |||||| |||| | |||||| || ||
Sbjct 167515 ATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTACCACTAAAGAAAATCCCT 167574
Query 39252 TCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCCAA 39311
|| ||| ||||| || || | || | | ||||| || || | | ||||||
Sbjct 167575 TCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCATTCTTGCTGGATATCCAA 167634
Query 39312 TTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAAT 39371
|||| ||||| || || || || || | | | || | | || || || || |||||
Sbjct 167635 TTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTCTCAATTGCATTGAATAAG 167694
Query 39372 TCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATTTCAGAA 39431
| || ||||| || ||
Sbjct 167695 AAGTCACGCTGCTTTGCATCTCTAATATAAGTTTCAATTAATATTGAGTACATCTCCGAG 167754
Query 39432 TGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATACTGAACT 39491
|||||| ||||||||| ||||| ||| ||| || | ||||||| | ||||||
Sbjct 167755 TGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGAGCTTCTGGAACTTGAACT 167814
Query 39492 TCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGAAT 39551
|| | ||| || |||| |||||||||| ||| || ||||||||||| || |||||
Sbjct 167815 TCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCATCAGATGCAGCAAAGAAA 167874
Query 39552 GCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCCAAGATTCAAGA 39611
||||| |||| |||||||| || ||| || | ||| | ||| ||| | |
Sbjct 167875 GCTAATACATGCGAGATAAAATGACGCTCTGAATCCTTGAGATTGTTCCAGTCTTCCATA 167934
Query 39612 TCGTTTGATAAATCTACTTCTTCTATTGTCCAAAA 39646
|| ||||||||||| ||||| || | |||||| ||
Sbjct 167935 TCTTTTGATAAATCGACTTCCTCGACTGTCCAGAA 167969
>seq17255
Length=1118
Score = 122 bits (134), Expect = 2e-22
Identities = 108/135 (80%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 171936 AAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA 171995
|| || || | ||||||||| ||||| |||||||| |||||||| |||||| ||||||
Sbjct 1 AAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTTACA 60
Query 171996 TTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTA 172055
|| |||||||| || | || ||||| | ||||| |||||||||||||||||||||
Sbjct 61 TTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTA 120
Query 172056 ATGAATATCTGCATT 172070
| ||| || ||||||
Sbjct 121 ACGAAAATTTGCATT 135
>seq296
Length=113092
Score = 107 bits (118), Expect = 3e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
|| || | ||| || | || ||||| || |||| ||||| ||||| || ||
Sbjct 112857 CCTCCACGAAGACGAAGAACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTC 112916
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
|| | || | || ||||||||||| || || || || || | ||||||||| |||||
Sbjct 112917 AATGTACGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGA 112976
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
||||||||||| ||||| || || |||||||| || || ||||| | || |||
Sbjct 112977 ATTCCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTCAACT 113036
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|||| || |||||||| || || || || || | ||| || |||||
Sbjct 113037 TCTAATGTGATGGTTTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904841547945000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |