Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq343 181 1e-40
seq442 132 4e-26
seq296 109 5e-19
seq17255 93.3 4e-14
>seq343
Length=103200
Score = 181 bits (200), Expect = 1e-40
Identities = 936/1477 (63%), Gaps = 56/1477 (4%)
Strand=Plus/Plus
Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212
||| || |||||||||| || |||| || || ||||| |||| | |||||||||||
Sbjct 5010 TTTGTCAACAGTAAACTGAATAGCATTTGCAGCGGGTTTTGTTCGTAAGTAATACATTCC 5069
Query 138213 CGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271
||||| | |||||||||| | |||| | || || || || | | | | ||| | |
Sbjct 5070 AGTTTTCAGTCCCATTTTCC-ATCCGTAAAAATGAATGGACGTTAATTTCCCATAATTGG 5128
Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331
||| || | | || |||||||| ||||| || || || ||||| || ||||| |
Sbjct 5129 GTTCAGCTACATGAATATTAAACGACTGACTTTGGTCTATAAAAGCTCCACGATCGGCAG 5188
Query 138332 CCATGTTAATTAAATTTTTACTTTTC----ATCTCCCACACGGTCTTGTATAGATCACGA 138387
||| | |||| | | ||| | || ||||| || || || |||| ||
Sbjct 5189 ACATTTGAATT----TGTGTCTTGACGGAAATTTCCCAAACCGTTTTATATATATTTTTT 5244
Query 138388 ATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTT 138447
|||| || ||| ||||| | || || || || ||||| || ||
Sbjct 5245 ATATCATCTGGAATTTGCTCAATAGTCTGTATTGAACCATTATTTGCAATAATTTTGTTC 5304
Query 138448 CTCATGTCATCGTTGTACAGATTCAACTTGA-TCAAGTCGTTTATCAGATATCTGTTTAT 138506
|||| || || | | | | || || | |||| || || || |||| || |
Sbjct 5305 TTCATATCGTCATCCCATAAAC-CACGTTCAGTCAAATCCTTGATAAGATGGTGATTAAC 5363
Query 138507 GACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAA 138566
|| ||||||||||| | || |||||| |||| || | ||| |||| |||||
Sbjct 5364 AACTTGAAATTCACCACTGAGAACACGACGATTATAAACATTACTTGTGTAAGGTTCAAA 5423
Query 138567 CGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAG 138626
|| || || |||| ||||||||| || | || |||||||| || | || ||
Sbjct 5424 GCTCTCATTATTACCCAAAATCTGAGCAGTTGATGCTGTCGGCATTGGTGCAATTAAGAG 5483
Query 138627 AGAATTCCGTAAACCGTGAAGC---TTGATTCGTTCCTTGAGCGACGACCAGTCCCACAA 138683
||||| || | ||| || | || ||| ||| || || | ||| ||||||||
Sbjct 5484 TGAATTTCGGAGACC---AAACTTTTTAATTTTTTCTTTTAGAGCTTCCCAATCCCACAA 5540
Query 138684 ATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTG---CGGGACT 138740
|||| | || | || | ||||||||| || ||||| | || ||| | ||||
Sbjct 5541 ATCGGTGGGAGTCTTATCCCACATATCATATTGTAATACACC---TTTTGACACCGGACA 5597
Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800
|| ||||| | || ||| || || | || || || || ||| | ||| | ||
Sbjct 5598 TCCATCGTAAGTCTCATATGGTCCCAATTGTTCTGCTAATTCACAGCTGGACTCCAATGC 5657
Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860
|||||| ||||| ||||| || || ||||| | | || ||| || ||
Sbjct 5658 ACCATAATAAATTGTTTCAAATATTTGTTGATTTAAATTTTTCGCTTCGTTAGATTCATA 5717
Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920
||||| | | || | || || || |||| ||||| || || | ||| | ||| ||
Sbjct 5718 TGGCATTCTCATCAAAATAAAAGCATCTGCCAATCCTTGAACTCCAATTCCAATAGGACG 5777
Query 138921 ATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTT 138980
||| | | |||||| ||| || |||| | ||||| || ||||| | || |||||
Sbjct 5778 ATGTCTAAAGTTTGACCGTTTAGCTTCTTCAACGGGATAGTAATTTACGTTAATAATTTT 5837
Query 138981 GTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCC 139040
|| ||||| | ||| | || || | ||| ||| | ||| || ||| | |
Sbjct 5838 ATTCAAATTCCTTGTGACTATTTTTGTAACTTCCTTCAATTTGTGAAAGTCATAT-TCTC 5896
Query 139041 CCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACAC 139100
|| | | || | |||||| | || | | ||| || |||| || || ||
Sbjct 5897 TTCGATTTTGT--------TTGACAAACATATTTAAAGCAATTGATGCTAAATTACAAAC 5948
Query 139101 CGCCACTTCGTCGGGGTCGCTG--TATTCGACAATTTCGGCACACAAATTACTACACTTG 139158
|| ||||| || | || |||| || ||||| | ||| ||||| |||
Sbjct 5949 TGCAACTTCATC--CTTACTTGAATATTGTACTATTTCCGTACATAAATTCGAACAACGT 6006
Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218
|| || || | ||| |||||||| ||| ||||| || | ||| || || ||||||||
Sbjct 6007 ATTGTCCCAAGATTCTGTTGATTTGATTTCCGGTTGCATGAATCCTTATACAGCATATAA 6066
Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGA---ACAAGTCCCTAGCTTGT 139275
||||| |||||||| ||||| | ||| ||||| | || |||| || || | |
Sbjct 6067 GGTGTACCAGTTTCTACTTGAGCCTC---AATGATTGCGAACCACAAATCTTGTGCCTTT 6123
Query 139276 ATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCA 139335
| |||||| | || | | || || || ||| || |||| | ||| |||
Sbjct 6124 ACTTGACGAATATACCTTCCTTCTGCTTCATAGCCTTCATAAAGTTTCACAAATTCCTCA 6183
Query 139336 CCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTC 139395
||||| | ||| ||||| || ||| | | ||||||||| | ||||| | | ||
Sbjct 6184 CCGTACGATTCAAAAAGACCGGGACTACTATTAGGACACATTAATGACCACATTTCATTG 6243
Query 139396 GCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGC--GC- 139452
| || || | |||||||| ||| ||||||||||| || | | || || | ||
Sbjct 6244 TTTTCAACCCGACGCATGAACAAATCTGGAATCCACAATGCATAAAACATGTCTCTAGCT 6303
Query 139453 --GCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAG 139510
| |||||| | |||| || || | || | | || || ||||||| |||
Sbjct 6304 CTGACTTCTTCTTTTCC---AGTATTTTTC--TTTAAATCCAGAAATTCAAAAATATCAC 6358
Query 139511 CGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGT---TTGCCACCTTGATCGA 139567
| ||||| ||||||| ||| || || | |||||| ||| || |||||||| || |
Sbjct 6359 CATGCCAAGGTTCCAAATATATTGCAAACGCGCCTGGACGTTTATTTCCACCTTGGTCAA 6418
Query 139568 CGTGTCGTACAGCATTATTGAATACGCGCAACATCGG 139604
| | ||| | | ||||||| |||| | ||||| ||
Sbjct 6419 CATAACGTGCGGTATTATTGTATACTCTTAACATTGG 6455
>seq442
Length=86436
Score = 132 bits (146), Expect = 4e-26
Identities = 166/222 (75%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | ||||| | || ||||| || ||||| |||||||| || |||
Sbjct 25219 ACCATGCAGATCTTCGTCAAAACCTTGACGGGTAAGACAATTACCCTCGAAGTCGA-GCC 25161
Query 24761 ACC-GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
| | ||||| | |||| || || ||||| ||||| || |||||||| || || ||
Sbjct 25160 ATCTGACACGATTGAAAATGTCAAGGCTAAGATTCAAGATAAGGAAGGAATTCCACCAGA 25101
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGA 24876
|||||| |||||||||||||| || ||||| | || ||| ||| ||| || ||
Sbjct 25100 TCAACAGCGTTTGATCTTTGCTGGAAAACAATTAGAAGATGGTCG---TACATTGAGCGA 25044
Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| ||||| ||||| || || ||||| ||||| ||||||||
Sbjct 25043 CTACAACATCCAAAAAGAGTCAACACTTCACTTAGTGTTGCG 25002
>seq296
Length=113092
Score = 109 bits (120), Expect = 5e-19
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || | || || ||||| || || | ||||| || |||| |
Sbjct 113083 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAAACCATCACATTAGAAGTTGA-GCCATC 113025
Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | |||| ||||| |||||||||||||||||||||||| || || || ||
Sbjct 113024 AGACACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGAATTCCACCAGACCA 112965
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTA 24879
||| ||||||||||| || || ||||| |||| ||| ||| ||| || || ||
Sbjct 112964 ACAGCGTTTGATCTTCGCAGGAAAACAATTGGAAGATGGTCG---TACATTGAGCGACTA 112908
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || || ||||| ||| | || ||||| | || | || |||||
Sbjct 112907 CAATATCCAGAAAGAATCTACATTGCATTTGGTTCTTCGTCTTCGTGGAGG 112857
>seq17255
Length=1118
Score = 93.3 bits (102), Expect = 4e-14
Identities = 103/135 (76%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| |||| |||||||||||||| | ||||| || |||| |
Sbjct 134 ATGCAAATTTTCGTTAAAACATTAACTGGTAAAACTATTACCTTGGAAGTTGA-GCCATC 76
Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | |||| ||||| || |||||||| || |||||||| || || || ||
Sbjct 75 TGATACTATTGAAAATGTAAAGGCTAAAATCCAAGATAAGGAAGGAATTCCACCAGACCA 16
Query 24823 ACAACGTTTGATCTT 24837
||| |||||||||||
Sbjct 15 ACAGCGTTTGATCTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449751242687000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |