Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 208 6e-49 >seq1 Length=756357 Score = 208 bits (230), Expect = 6e-49 Identities = 310/440 (70%), Gaps = 0/440 (0%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 || || ||||||| |||||||| |||| |||||| | | | | || ||||| Sbjct 748849 GGTGGATTTTTCAAAATGAAGGTATTGACTTTATGCTGTACTTTGATCAATCCATGATAT 748908 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 || || |||||||||| || |||| | | ||| |||||| || | | || || Sbjct 748909 CCACAAGCTTTGCAGCTTTGCGAGATGGTTTCCTTCTTAGCGACAACAGTCAAGTCTGTT 748968 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 || || ||||||||||| ||||| || || |||| || ||||| || ||||||| ||| Sbjct 748969 TCAGGATTGTCACATTCGGGACATAAGACGTACTTTCGAATGAATCCGTCAAGCAAGTCT 749028 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACC 34443 || || || | || || || ||||||||||| || || || || || | ||| | | Sbjct 749029 TGCAATTTGGATGCATCATGCGATCCGTTGACGATAAAACGCTCATTCTTATGATCAAAC 749088 Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 || ||||| || || || ||||| || || || || || || || | || ||||| Sbjct 749089 TGAGTTTGAGCTCCAAGTTCGCATCCAAAATATTTAGTTGGATATGTTGCTGGACGATTT 749148 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||||| || | ||| | ||| ||||| |||||||| |||||||| || ||||| || Sbjct 749149 AATGCCTTAGCAACTTCTGCCATATTGACAATGACAGTTTTGATGCCATTTCCCTTGCCC 749208 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || || ||||| || || || |||||||||||||| || | ||| | ||||| || Sbjct 749209 TCAACTTTGGCACAAATTCGGGGCATTTTGTAGCGATAATAAAGGTCAGTAACATTACGA 749268 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || || || | ||| ||||| Sbjct 749269 TTGACATTTAAAGTTCCCAT 749288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412710655030325