Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq767 123 3e-23
>seq767
Length=55330
Score = 123 bits (136), Expect = 3e-23
Identities = 315/469 (67%), Gaps = 13/469 (3%)
Strand=Plus/Plus
Query 180507 GTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTCGAAAAGAAGGTGATTTAGGAC 180566
|| ||||| | || | ||| | | || |||||| ||| ||| |||||||| || |
Sbjct 37528 GTACGCGTGAATTCCTTGATGCATCCGGTTTTCATGATCGTCAAGTTGGTGATTTGGGTC 37587
Query 180567 CAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACT 180626
|| ||||||||||||| ||| ||||| || || |||||| || ||| | |
Sbjct 37588 CAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATATAAAACATGCGATGATGAAT 37647
Query 180627 ATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACTATAAAAAATAATCCCG 180686
|| || ||||| || |||||||||| | || || ||| || ||| |||||
Sbjct 37648 ATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGAACGCATCAAAGCCAATCCA- 37706
Query 180687 AATGC-CGAAGAATAATCATAGATAGT-TGGAATGTATCACAATTACCAGATATGGCTCT 180744
|||| || | || || || || | |||||| | | | ||| | ||||| ||
Sbjct 37707 AATGATCGTCGTATTAT-ATTGAGCGCATGGAATCCAGTGGACATTCCACAAATGGCACT 37765
Query 180745 TCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAAATTTATTTAGATTGCCA 180804
|||||||||||||||| | || ||||||||||| ||| | ||| || |||||
Sbjct 37766 TCCACCATGTCACTGTCTCGTTCAATTTTATGTCGCTAAT--GGTGAATTGAG-CTGCCA 37822
Query 180805 ATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAATATTGCTTTCTATTC 180864
||| || |||||||| || ||| | || | || || || | |||||||| | ||| |
Sbjct 37823 ATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTCAATATTGCATCGTATGC 37882
Query 180865 ATTTTTG--GTATGTGTTCTCTCAAAGTGGTGC-AATTTAACCCCTGGAAAATTTATTCA 180921
|| ||| ||| || | |||| || | | ||||| | ||||| | ||| ||||
Sbjct 37883 CTTATTGACGTACATGATTGCTCA---TGTTACAAATTTGAAGCCTGGTGATTTTGTTCA 37939
Query 180922 CACTTTTGGGGATGTTCATGTATATTCTAACCATATTGACCAATTAAAA 180970
|||||||| |||| |||| | || | || || | ||| | ||| |||
Sbjct 37940 TACTTTTGGCGATGCTCATATTTACACGAATCACACTGAGCCATTGAAA 37988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655066829225000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |