Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq767 86.0 7e-12 >seq767 Length=55330 Score = 86.0 bits (94), Expect = 7e-12 Identities = 188/278 (68%), Gaps = 4/278 (1%) Strand=Plus/Plus Query 106865 CAAATGGCGCTTCCACCTTGTCATTGTCTTGTCCAATTCTATGTGCGCAACAATACCCAT 106924 |||||||| |||||||| ||||| ||||| || ||||| ||||| ||| | || | Sbjct 37755 CAAATGGCACTTCCACCATGTCACTGTCTCGTTCAATTTTATGT-CGCTA--ATGGTGAA 37811 Query 106925 CTAGATTGCCAGTTGTACCAAAGATCCGCCGATATTGGGCTCGGAGTCCCGTTCAACATC 106984 | ||||| || ||||||||||| || ||||| || || ||||| || ||||| || Sbjct 37812 TTGAGCTGCCAATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTCAATATT 37871 Query 106985 GCCAGCTACTCATTTCTAATGTACGTTTTGGCAAAATGGACAAATCTGACCCCAGGACGT 107044 || || | || | | |||| | | || | |||||| ||| || || | Sbjct 37872 GCATCGTATGCCTTATTGACGTACATGATTGCTCATGTTACAAATTTGAAGCCTGGTGAT 37931 Query 107045 TTTATCCATACGTTTGGAGACGTGCATGTGTACTCGACTCATGTTGAAGCTTTGAGGGAG 107104 ||| | ||||| ||||| || | ||| | ||| ||| ||| ||| | |||| ||| Sbjct 37932 TTTGTTCATACTTTTGGCGATGCTCATATTTACACGAATCACACTGAGCCATTGAAAGAG 37991 Query 107105 CAAATTGCCAGGCAGCCACATTCTTTTCCCACAGTCGA 107142 ||| | | | |||||| || |||||||||| || Sbjct 37992 CAACTCGAACGTAAGCCAC-GTCCATTCCCACAGTTGA 38028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521375934697000