Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq726 145 1e-29
>seq726
Length=60972
Score = 145 bits (160), Expect = 1e-29
Identities = 267/389 (69%), Gaps = 2/389 (1%)
Strand=Plus/Minus
Query 182829 CGTTGAAACGTTTATAGATGAAATAATTGTAAGAAGAGAACTATCGGATAATTTTTGTTA 182888
|||||| | ||| || ||| ||||||| | ||||| | |||||||||||||
Sbjct 19684 CGTTGATGCCTTTTGTGAAGAAGCAATTGTACGTCGAGAATTGAGTGATAATTTTTGTTT 19625
Query 182889 CTATAATAAACATTACGATAGTGTTCAGTCTACTCACGCATGGGCTAGAAGAACATTAGA 182948
||||||||| ||||||| | | | | | | | ||||||| | ||||||| |
Sbjct 19624 TTATAATAAAGATTACGACAATCTAAAAGGAATTACAGATTGGGCTATGAAAACATTAAA 19565
Query 182949 AGATCACGTTAATGATCCTAGAAAGTATATCTATTCTATTAAACAACTCGAAAAGGCAGA 183008
|||||| ||| || | | ||| | ||| | ||| || | ||| ||||| |
Sbjct 19564 TGATCACCGTAAAGACAAACGTGATTATGTGTATACACGCAAAGAATTTGAAGAGGCAAA 19505
Query 183009 AACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCA 183068
||| || || | |||||||| ||||||| || |||| | |||||| ||||||||
Sbjct 19504 AACTCACGATGATTTATGGAATAGCGCACAAATTCAAATGACAAAAGAAGGTAAAATGCA 19445
Query 183069 TAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGA 183128
| | ||||| |||||||| |||||||||||||| | ||||||||| ||| || |||||
Sbjct 19444 TGGATTTTTGCGAATGTATTGGGCTAAAAAGATTTTAGAATGGACAGCAACGCCAGAAGA 19385
Query 183129 TGCT-TTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTA 183187
|| | |||| | |||||| | || || | | || || |||| ||||| |
Sbjct 19384 TGGTCTTGA-AACTGCAATCTATTTAAATGATCGCTTTAATCTTGATGGTAGAGATCCGA 19326
Query 183188 ACGGATACGTAGGTTGTATGTGGTCTATT 183216
|||| || || || || |||||| ||||
Sbjct 19325 ACGGCTATGTGGGCTGCATGTGGAGTATT 19297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903117309044000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |