Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_024486.1 Length=43734 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 6e-12 >seq6 Length=649598 Score = 84.2 bits (92), Expect = 6e-12 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 1371 GGTTGTTACGGCAGAATAGCTCCAAGATCCGGTCTAGCGGCAAAGTATTCAATTGATGTG 1430 || ||||| || |||| || ||| | || || |||| ||||| ||| |||||||| Sbjct 425318 GGCTGTTATGGACGAATTGCACCACGTTCTGGATTAGCAGCAAAAAATTTCATTGATGTT 425377 Query 1431 GGCGCTGGAGTTATTGACCCTGATTATCGTGGAAGTATCAGTGTTGTTTTATTTAATCAT 1490 || ||||||||| | ||| || ||| | |||| | | ||||||| | ||||||||| Sbjct 425378 GGTGCTGGAGTTGTAGACGAAGACTATAGAGGAAATTTAGGTGTTGTCATGTTTAATCAT 425437 Query 1491 TCGGATGTGCCTTTCCATGTGTCGAGGGGAGACAGAATAGCTCAGTTAATTTGTGAGCG 1549 || ||||| ||| |||| | | || || | || ||||| || || ||||| || Sbjct 425438 TCTGATGTCGATTTTAATGTCGCCAAAGGCGATCGTATTGCTCAATTGATCTGTGAACG 425496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139783986840800