Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq442 102 5e-17
seq296 84.2 1e-11
>seq442
Length=86436
Score = 102 bits (112), Expect = 5e-17
Identities = 164/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | | || ||||| || || || || ||||||||| |||||||| |||
Sbjct 24988 CACCACCACGAAGGCGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGC 25047
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| ||| || | || || ||||||||||| ||||| ||||||||||| |||||| | |
Sbjct 25048 TCAATGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTG 25107
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||| || || ||| || | | |||| || | ||||| || ||
Sbjct 25108 GAATTCCTTCCTTATCTTGAATCTT-AGCCTTGACATTTTCAATCGTGTCAGATGGCTCG 25166
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|| || | || || || ||||| || || ||||| || ||||||||||| ||
Sbjct 25167 ACTTCGAGGGTAATTGTCTTACCCGTCAAGGTTTTGACGAAGATCTGCATGGT 25219
>seq296
Length=113092
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|||||||| | || ||||| || || ||||| ||| | ||| || | || |||
Sbjct 112875 ACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTCAATGTACGACCATCTTCC 112934
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
||||||||||| || || ||||||||||| || ||| | || | |||||||||||
Sbjct 112935 AATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTGTCTTGG 112994
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| || || | |||| || | ||||| || || || || | ||||| |||||
Sbjct 112995 ATCTT-TGCCTTTACATTTTCAATTGTGTCTGATGGCTCAACTTCTAATGTGATGGTTTT 113053
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||| || || || || || || |||||
Sbjct 113054 TCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328599741768000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |